Danyil Grybchuk, N. S. Akopyants, Aleksei Kostygov, A. Konovalovas, L.F. Lye, D.E. Dobson, H. Zangger, N. Fasel, Anzhelika Butenko, A. O. Frolov, J. Votýpka, C.M. dAvila-Levy, P. Kulich, J. Moravcová, P. Plevka, I.B. Rogozin, S. Serva, J. Lukeš, S. M. Beverley, Vyacheslav Yurchenko ... other authors

Year: 2018, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

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Extensive flagellar remodeling during the complex life cycle of Paratrypanosoma, an early-branching trypanosomatid

T. Skalický, E. Dobáková, R.J. Wheeler, M. Tesařová, Pavel Flegontov, D. Jirsová, J. Votýpka, Vyacheslav Yurchenko, F.J. Ayala, J. Lukeš ... other authors

Year: 2017, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

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Leptomonas seymouri: Adaptations to the Dixenous Life Cycle Analyzed by Genome Sequencing, Transcriptome Profiling and Co-infection with Leishmania donovani

Natalia Kraeva, A. Butenko, J. Hlavacova, Aleksei Kostygov, J. Myskova, Danyil Grybchuk, T. Lestinova, J. Votypka, P. Volf, F. Opperdoes, P. Flegontov, J. Lukes, Vyacheslav Yurchenko ... other authors

Year: 2015, PLoS Pathogens

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Evolution of parasitism in kinetoplastid flagellates

J. Lukeš, T. Skalický , J. Týč , J. Votýpka , Vyacheslav Yurchenko

Year: 2014, MOLECULAR AND BIOCHEMICAL PARASITOLOGY

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Diversity and phylogeny of insect trypanosomatids: all that is hidden shall be revealed

D.A. Maslov, J. Votypka, Vyacheslav Yurchenko, J. Lukes

Year: 2013, TRENDS PARASITOL

journal article

Distribution and Functional Analysis of Isocitrate Dehydrogenases across Kinetoplastids

Ľubomíra Chmelová, Kristína Záhonová, Amanda Tábita da Silva Albanaz, Liudmyla Hrebenyk, Anton Horvath, Vyacheslav Yurchenko, Ingrid Sveráková ... other authors

Year: 2024, GENOME BIOLOGY AND EVOLUTION

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In silico prediction of the metabolism of Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code

Fred R. Opperdoes, Kristína Záhonová, Ingrid Sveráková, Barbora Bučková, Ľubomíra Chmelová, Julius Lukeš, Vyacheslav Yurchenko ... other authors

Year: 2024, BMC GENOMICS

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Parasites of firebugs in Austria with focus on the "micro"-diversity of the cosmopolitan trypanosomatid Leptomonas pyrrhocoris

Aleksei Kostygov, Ľubomíra Chmelová, Julia Reichl, Alexandra Jaszayova, Jan Votypka, Hans-Peter Fuehrer, Vyacheslav Yurchenko ... other authors

Year: 2024, PARASITOLOGY RESEARCH

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A neo-functionalized homolog of host transmembrane protein controls localization of bacterial endosymbionts in the trypanosomatid Novymonas esmeraldas

Alexandra Zakharova, Daria Tashyreva, Anzhelika Butenko, Jorge Morales, Andreu Saura Rebollar, Michaela Svobodová, Gereon Poschmann, Satish Nandipati, Alena Zakharova, David Noyvert, Ondřej Gahura, Jiri Tyc, Kai Stuehler, Aleksei Kostygov, Eva C.M. Nowack, Julius Lukes, Vyacheslav Yurchenko ... other authors

Year: 2023, CURR BIOL

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A Study of Oribatid Mites as Potential Intermediate Hosts of Anoplocephalid Tapeworms of Tatra chamois and Tatra marmots from the Tatra Mountains, Central Europe, and Report of a New Intermediate Host for Andrya cuniculi, the Parasite of Leporidae

Alexandra Jaszayova, Jana Režnarová, Gabriela Chovancova, Aleksei Kostygov, Vyacheslav Yurchenko, Daniela Antolová, Tomasz Zwijacz-Kozica, Alexander Csanady, Zuzana Hurníková ... other authors

Year: 2023, LIFE-BASEL

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Deletions across the SARS-CoV-2 Genome: Molecular Mechanisms and Putative Functional Consequences of Deletions in Accessory Genes

Igor B. Rogozin, Andreu Saura Rebollar, Anastasiia Bykova, Vyacheslav Brover, Vyacheslav Yurchenko

Year: 2023, Microorganisms

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Diversity of RNA viruses in the cosmopolitan monoxenous trypanosomatid Leptomonas pyrrhocoris

Diego Henrique Macedo, Danyil Grybchuk, Jana Režnarová, Jan Votypka, Donnamae Saavedra Klocek, Tatiana Yurchenko, Jan Ševčík, Alice Magri, Michaela Urda Dolinska, Kristína Záhonová, Julius Lukeš, Elena Serviene, Alexandra Jaszayova, Saulius Serva, Marina N. Malysheva, Alexander O. Frolov, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2023, BMC BIOLOGY

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Evolution of RNA viruses in trypanosomatids: new insights from the analysis of Sauroleishmania

Donnamae Saavedra Klocek, Danyil Grybchuk, Lucie Tichá, Jan Votýpka, Petr Volf, Aleksei Kostygov, Vyacheslav Yurchenko ... other authors

Year: 2023, PARASITOLOGY RESEARCH

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First report of putative Leishmania RNA virus 2 (LRV2) in Leishmania infantum strains from canine and human visceral leishmaniasis cases in the southeast of Brazil

Felipe Dutra Rego, Eduardo Sergio da Silva, Valeriana Valadares Lopes, Rafael Goncalves Teixeira-Neto, Vinícius Silva Belo, Antonio Augusto Fonseca Jr, Diego Andrade Pereira, H. P. Pena, Marcia Dalastra Laurenti, Gabriela Araujo, Vania Lucia Ribeiro da Matta, Islam Hussein Chouman, Thaina Bergantin Burrin, Carmen M. Sandoval, Stella Maria Barrouin-Melo, Flaviane Alves de Pinho, Helida Monteiro de Andrade, Ramon Vieira Nunes, Celia Maria Ferreira Gontijo, Vanete Thomaz Soccol, Donnamae Saavedra Klocek, Danyil Grybchuk, Diego H. Macedo, Rubens Lima do Monte-Neto, Vyacheslav Yurchenko, Rodrigo Pedro Soares ... other authors

Year: 2023, MEMORIAS DO INSTITUTO OSWALDO CRUZ

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Genomic analysis of Leishmania turanica strains from different regions of Central Asia

Tatiana S. Novozhilova, Daniil S. Chistyakov, L. Akhmadishina, Alexander N. Lukashev, Evgeny S Gerasimov, Vyacheslav Yurchenko ... other authors

Year: 2023, PLOS NEGLECT TROP D

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Kinetoplast Genome of Leishmania spp. Is under Strong Purifying Selection

Evgeny S. Gerasimov, Tatiana S. Novozhilova, Sara L. Zimmer, Vyacheslav Yurchenko

Year: 2023, TROPICAL MEDICINE AND INFECTIOUS DISEASE

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Revisiting epidemiology of leishmaniasis in central Asia: lessons learnt

Vyacheslav Yurchenko, Daniil S. Chistyakov, L. Akhmadishina, Alexander N. Lukashev, Jovana Sadlova, Margarita Strelkova ... other authors

Year: 2023, Parasitology

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RNA viruses of Crithidia bombi, a parasite of bumblebees

Donnamae Saavedra Klocek, Danyil Grybchuk, Diego Henrique Macedo, Arnau Galan Rigol, Jan Votypka, Regula Schmid-Hempel, Paul Schmid-Hempel, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2023, JOURNAL OF INVERTEBRATE PATHOLOGY

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Shining the spotlight on the neglected: new high-quality genome assemblies as a gateway to understanding the evolution of Trypanosomatidae

Amanda Tábita da Silva Albanaz, Mark Carrington, Alexander O. Frolov, Anna I. Ganyukova, Evgeny S. Gerasimov, Aleksei Kostygov, Julius Lukeš, Marina N. Malysheva, Jan Votýpka, Alexandra Zakharova, Kristína Záhonová, Sara L. Zimmer, Vyacheslav Yurchenko, Anzhelika Butenko ... other authors

Year: 2023, BMC GENOMICS

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Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment

Ambar Kachale, Zuzana Pavlíková, Anna Nenarokova, Adriana Roithova, Ignacio M. Durante, Petra Miletinova, Kristína Záhonová, Serafim Nenarokov, Jan Votypka, Eva Horáková, Robert L. Ross, Vyacheslav Yurchenko, Petra Beznoskova, Zdeněk Paris, Leoš Shivaya Valášek, Julius Lukeš ... other authors

Year: 2023, NATURE

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The 29-nucleotide deletion in SARS-CoV: truncated versions of ORF8 are under purifying selection

Anastasiia Bykova, Andreu Saura Rebollar, Galina V. Glazko, Abiel Roche-Lima, Vyacheslav Yurchenko, Igor B. Rogozin ... other authors

Year: 2023, BMC GENOMICS

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Transcriptome of Lafontella sp., an obscure relative of Phytomonas and Herpetomonas

Amanda Tábita da Silva Albanaz, Anzhelika Butenko, Aleksei Kostygov, Jan Votýpka, Vyacheslav Yurchenko

Year: 2023, Protistology

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Comparative Analysis of Three Trypanosomatid Catalases of Different Origin

Ľubomíra Chmelová, Amanda Tábita da Silva Albanaz, Jana Režnarová, Richard Wheeler, Aleksei Kostygov, Natalia Kraeva, Vyacheslav Yurchenko ... other authors

Year: 2022, ANTIOXIDANTS

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Development of two species of the Trypanosoma theileri complex in tabanids

Aleksei Kostygov, Alexander O. Frolov, Marina N. Malysheva, Anna I. Ganyukova, Daria Drachko, Vyacheslav Yurchenko, Vera V. Agasoi ... other authors

Year: 2022, Parasites and Vectors

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Differences in Charge Distribution in Leishmania tarentolae Leishmanolysin Result in a Reduced Enzymatic Activity

Vitor Ennes-Vidal, Deborah Antunes, Ester Poláková, Vyacheslav Yurchenko, Simone S. C. Oliveira, Fabio Faria da Mota, Ana Carolina R. Guimaraes, Ernesto R. Caffarena, Andre L. S. Santos, Marta H. Branquinha, Claudia M. d Avila-Levy ... other authors

Year: 2022, International Journal of Molecular Sciences

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Elimination of LRVs Elicits Different Responses in Leishmania spp.

Andreu Saura Rebollar, Alexandra Zakharova, Donnamae Klocek, Evgeny S. Gerasimov, Anzhelika Butenko, Diego Henrique Macedo, Elena Serviene, Diana Zagirova, Anastasia Meshcheryakova, Igor B. Rogozin, Saulius Serva, Aleksei Kostygov, Vyacheslav Yurchenko ... other authors

Year: 2022, MSPHERE

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Leishmania guyanensis M4147 as a new LRV1-bearing model parasite: Phosphatidate phosphatase 2-like protein controls cell cycle progression and intracellular lipid content

Alexandra Zakharova, Amanda Tábita da Silva Albanaz, Fred R. Opperdoes, Ingrid Sveráková, Diana Zagirova, Andreu Saura Rebollar, Ľubomíra Chmelová, Evgeny S. Gerasimov, Tereza Lestinova, Tomas Becvar, Jovana Sadlova, Petr Volf, Julius Lukes, Anton Horvath, Anzhelika Butenko, Vyacheslav Yurchenko ... other authors

Year: 2022, PLOS NEGLECT TROP D

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Mitochondrial RNA editing in Trypanoplasma borreli: New tools, new revelations

Evgeny S. Gerasimov, Dmitry A. Afonin, Oksana Korzhavina, Julius Lukeš, Ross Low, Neil Hall, Kevin M Tyler, Vyacheslav Yurchenko, Sara L. Zimmer ... other authors

Year: 2022, COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL

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No evidence for widespread positive selection on double substitutions within codons in primates and yeasts

Frida Belinky, Anastasiia Bykova, Vyacheslav Yurchenko, Igor B. Rogozin

Year: 2022, FRONTIERS IN GENETICS

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Roe deer (Capreolus capreolus) are a novel potential reservoir for human visceral leishmaniasis in the Emilia-Romagna region of northeastern Italy

Alice Magri, Claretta Bianchi, Ľubomíra Chmelová, Monica Caffara, Roberta Galuppi, Marialetizia Fioravanti, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2022, INTERNATIONAL JOURNAL FOR PARASITOLOGY

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Structures of L-BC virus and its open particle provide insight into Totivirus capsid assembly

Danyil Grybchuk, Michaela Prochazkova, Tibor Fuzik, Aleksandras Konovalovas, Saulius Serva, Vyacheslav Yurchenko, Pavel Plevka ... other authors

Year: 2022, Communications Biology

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The roles of mosquitoes in the circulation of monoxenous trypanosomatids in temperate climates

Aleksei Kostygov, Marina N. Malysheva, Anna I. Ganyukova, Alexey V. Razygraev, Daria O. Drachko, Vyacheslav Yurchenko, Vera V. Agasoi, Alexander O. Frolov ... other authors

Year: 2022, PATHOGENS

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Trypanosoma cruzi strain and starvation-driven mitochondrial RNA editing and transcriptome variability

Evgeny S. Gerasimov, Roger Ramirez-Barrios, Vyacheslav Yurchenko, Sara L. Zimmer

Year: 2022, RNA

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Virion structure of Leishmania RNA virus 1

Michaela Procházková, Tibor Fuzik, Danyil Grybchuk, Vyacheslav Yurchenko, Pavel Plevka

Year: 2022, Virology

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A New Model Trypanosomatid, Novymonas esmeraldas: Genomic Perception of Its "Candidatus Pandoraea novymonadis" Endosymbiont

Alexandra Zakharova, Andreu Saura Rebollar, Anzhelika Butenko, Lucie Podešvová, Sandra Warmusová, Aleksei Kostygov, Anna Nenaroková, Julius Lukeš, Fred R. Opperdoes, Vyacheslav Yurchenko ... other authors

Year: 2021, MBIO

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Analyses of Leishmania-LRV Co-Phylogenetic Patterns and Evolutionary Variability of Viral Proteins

Aleksei Kostygov, Danyil Grybchuk, Yulia Kleschenko, Daniil S. Chistyakov, Alexander N. Lukashev, Evgeny S. Gerasimov, Vyacheslav Yurchenko ... other authors

Year: 2021, VIRUSES-BASEL

journal article

Analysis of Stop Codons within Prokaryotic Protein-Coding Genes Suggests Frequent Readthrough Events

Frida Belinky, Ishan Ganguly, Eugenia Poliakov, Vyacheslav Yurchenko, Igor B. Rogozin

Year: 2021, INT J MOL SCI

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Capsid Structure of Leishmania RNA Virus 1

Michaela Procházková, Tibor Fuzik, Danyil Grybchuk, Francesco Luca Falginella, Lucie Podešvová, Vyacheslav Yurchenko, Robert Vacha, Pavel Plevka ... other authors

Year: 2021, J VIROL

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Catalase impairs Leishmania mexicana development and virulence

Jovana Sádlová, Lucie Podešvová, Tomáš Bečvář, Claretta Bianchi, Evgeny S. Gerasimov, Andreu Saura Rebollar, Kristýna Glanzová, Tereza Leštinová, Nadezhda S. Matveeva, Ľubomíra Chmelová, Denisa Mlacovská, Tatiana Spitzova, Barbora Vojtková, Petr Volf, Vyacheslav Yurchenko, Natalia Kraeva ... other authors

Year: 2021, VIRULENCE

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Complete minicircle genome of Leptomonas pyrrhocoris reveals sources of its non-canonical mitochondrial RNA editing events

Evgeny S. Gerasimov, Anna A. Gasparyan, Dmitry A. Afonin, Sara L. Zimmer, Natalia Kraeva, Julius Lukeš, Vyacheslav Yurchenko, Alexander Kolesnikov ... other authors

Year: 2021, NUCLEIC ACIDS RES

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Development of Monoxenous Trypanosomatids and Phytomonads in Insects

Alexander O. Frolov, Aleksei Kostygov, Vyacheslav Yurchenko

Year: 2021, TRENDS PARASITOL

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Differences in mitochondrial NADH dehydrogenase activities in trypanosomatids

Petra Čermáková, Anna Maďarová, Peter Baráth, Jana Bellová, Vyacheslav Yurchenko, Anton Horváth ... other authors

Year: 2021, PARASITOLOGY

journal article

Diverse telomeres in trypanosomatids

Ester Poláková, Kristina Záhonová, Amanda Tábita da Silva Albanaz, Anzhelika Butenko, Lukeš Julius, Vyacheslav Yurchenko ... other authors

Year: 2021, PARASITOLOGY

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DNA Methylation, Deamination, and Translesion Synthesis Combine to Generate Footprint Mutations in Cancer Driver Genes in B-Cell Derived Lymphomas and Other Cancers

Igor B. Rogozin, Abiel Roche-Lima, Kathrin Tyryshkin, Kelvin Carrasquillo-Carrion, Artem G. Lada, Lennard Y. Poliakov, Elena Schwartz, Andreu Saura Rebollar, Vyacheslav Yurchenko, David N. Cooper, Anna R. Panchenko, Youri I. Pavlov ... other authors

Year: 2021, Frontiers in Genetics

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Editorial: Symbioses Between Protists and Bacteria/Archaea

Aleksei Kostygov, Joao M. P. Alves, Vyacheslav Yurchenko

Year: 2021, Frontiers in Microbiology

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Endosymbiont Capture, a Repeated Process of Endosymbiont Transfer with Replacement in Trypanosomatids Angomonas spp.

Tomáš Skalický, Joao M. P. Alves, Anderson C. Morais, Jana Režnarová, Anzhelika Butenko, Julius Lukeš, Myrna G. Serrano, Gregory A. Buck, Marta M. G Teixeira, Erney P. Camargo, Mandy Sanders, James A Cotton, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2021, Pathogens

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Euglenozoa: taxonomy, diversity and ecology, symbioses and viruses

Aleksei Kostygov, Anna Karnkowska, Jan Votypka, Daria Tashyreva, Kacper Maciszewski, Vyacheslav Yurchenko, Julius Lukeš ... other authors

Year: 2021, Open Biology

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Genetic diversity of Leishmania tropica: Unexpectedly complex distribution pattern

Arzuv Charyyeva, Ülfet Cetinkaya, Bora Özkan, Serkan Sahin, Nermin Yaprak, Izzet Sahin, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2021, ACTA TROP

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Genome Analysis of Endotrypanum and Porcisia spp., Closest Phylogenetic Relatives of Leishmania, Highlights the Role of Amastins in Shaping Pathogenicity

Amanda Tábita da Silva Albanaz, Evgeny S Gerasimov, Jeffrey J. Shaw, Jovana Sádlová, Julius Lukeš, Petr Volf, Fred R. Opperdoes, Aleksei Kostygov, Anzhelika Butenko, Vyacheslav Yurchenko ... other authors

Year: 2021, Genes

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Genomics of Trypanosomatidae: Where We Stand and What Needs to Be Done?

Vyacheslav Yurchenko, Anzhelika Butenko, Aleksei Kostygov

Year: 2021, PATHOGENS

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Characterization of a new cosmopolitan genus of trypanosomatid parasites, Obscuromonas gen. nov. (Blastocrithidiinae subfam. nov.)

Julius Lukes, Martina Tesarova, Vyacheslav Yurchenko, Jan Votypka

Year: 2021, EUR J PROTISTOL

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Ku80 is involved in telomere maintenance but dispensable for genomic stability in Leishmania mexicana

Ester Poláková, Amanda Tábita da Silva Albanaz, Alexandra Zakharova, Tatiana S. Novozhilova, Evgeny S. Gerasimov, Vyacheslav Yurchenko ... other authors

Year: 2021, PLOS NEGLECT TROP D

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Reductionist Pathways for Parasitism in Euglenozoans? Expanded Datasets Provide New Insights

Anzhelika Butenko, Michael Hammond, Mark C. Field, Michael L. Ginger, Vyacheslav Yurchenko, Julius Lukeš ... other authors

Year: 2021, TRENDS PARASITOL

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The effects of genetic drift and genomic selection on differentiation and local adaptation of the introduced populations of Aedes albopictus in southern Russia

Evgenii A. Konorov, Vyacheslav Yurchenko, Ivan Patraman, Alexander Lukashev, Nadezhda Oyun

Year: 2021, PeerJ

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The Remarkable Metabolism of Vickermania ingenoplastis: Genomic Predictions

Fred R. Opperdoes, Anzhelika Butenko, Alexandra Zakharova, Evgeny S. Gerasimov, Sara L. Zimmer, Julius Lukeš, Vyacheslav Yurchenko ... other authors

Year: 2021, PATHOGENS

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A novel endosymbiont-containing trypanosomatid Phytomonas borealis sp. n. from the predatory bug Picromerus bidens (Heteroptera, Pentatomidae)

AI Ganyukova, AO Frolov, MN Malysheva, Viktoriia SPODAREVA, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2020, FOLIA PARASITOLOGICA

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Catalase and ascorbate peroxidase in Euglenozoan protists

I Skodova-Sverakova, K Zahonova, B Buckova, Z Fussy, Vyacheslav Yurchenko, J Lukes ... other authors

Year: 2020, PATHOGENS

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Catalase compromises the development of the insect and mammalian stages of Trypanosoma brucei

E Horakova, D Faktorova, Natalia Kraeva, B Kaur, J Van Den Abbeele, Vyacheslav Yurchenko, J Lukes ... other authors

Year: 2020, FEBS JOURNAL

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Common structural patterns in the maxicircle divergent region of Trypanosomatidae

ES Gerasimov, KA Zamyatnina, NS Matveeva, YA Rudenskaya, Natalia Kraeva, AA Kolesnikov, Vyacheslav Yurchenko ... other authors

Year: 2020, PATHOGENS

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Endangered monoxenous trypanosomatid parasites: a lesson from island biogeography

Vyacheslav Yurchenko, Jan Votypka, Petr Kment, Julius Lukes

Year: 2020, BIODIVERS CONSERV

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Experimental infections and co-infections with Leishmania braziliensis and Leishmania infantum in two sand fly species, Lutzomyia migonei and Lutzomyia longipalpi

J Alexandre, J Sadlova, T Lestinova, B Vojtkova, M Jancarova, Lucie Podešvová, Vyacheslav Yurchenko, F Dantas-Torres, SP Brandao-Filho, P Volf ... other authors

Year: 2020, Scientific Reports

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First draft genome of the trypanosomatid Herpetomonas muscarum ingenoplastis through MinION Oxford Nanopore technology and Illumina sequencing

CM dAvila-Levy, B Bearzatto, J Ambroise, R Helaers, Anzhelika Butenko, Vyacheslav Yurchenko, KA Morelli, HCG Santos, P Brouillard, P Grellier, JL Gala, M Vikkula ... other authors

Year: 2020, Tropical Medicine and Infectious Disease

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Frequent Recombination Events in Leishmania donovani: Mining Population Data

Igor B. Rogozin, Arzuv Charyyeva, Ivan A. Sidorenko, Vladimir N. Babenko, Vyacheslav Yurchenko

Year: 2020, Pathogens

journal article

If host is refractory, insistent parasite goes berserk: Trypanosomatid Blastocrithidia raabei in the dock bug Coreus marginatus

Alexander Frolov, Marina Malysheva, Anna Ganyukova, Viktoriia Spodareva, Vyacheslav Yurchenko, Jana Králová, Aleksei Kostygov ... other authors

Year: 2020, PLOS One

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Large-scale phylogenetic analysis of trypanosomatid adenylate cyclases reveals associations with extracellular lifestyle and host-pathogen interplay

Ignacio Miguel Durante, Anzhelika Butenko, Vendula Rašková, Arzuv Charyyeva, Michaela Svobodová, Vyacheslav Yurchenko, Hassan Hashimi, Julius Lukeš ... other authors

Year: 2020, Genome Biology and Evolution

journal article

Lexis and grammar of mitochondrial RNA processing in trypanosomes

I Aphasizheva, J Alfonzo, J Carnes, I Cestari, J Cruz-Reyes, HU Goeringer, S Hajduk, J Lukes, S Madison-Antenucci, DA Maslov, SM McDermott, T Ochsenreiter, LK Read, R Salavati, A Schnaufer, A Schneider, L Simpson, K Stuart, Vyacheslav Yurchenko, ZH Zhou, A Zikova, LY Zhang, S Zimmer, R Aphasizhev ... other authors

Year: 2020, TRENDS IN PARASITOLOGY

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Saccharomyces paradoxus Transcriptional Alterations in Cells of Distinct Phenotype and Viral dsRNA Content

Bazilé Ravoityté, Juliana Lukša, Vyacheslav Yurchenko, Saulius Serva, Elena Serviené

Year: 2020, Microorganisms

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Sergentomyia schwetzi: Salivary gland transcriptome, proteome and enzymatic activities in two lineages adapted to different blood sources

N Polanska, Aygul Ishemgulova , V Volfova, Pavel Flegontov, J Votypka, Vyacheslav Yurchenko, P Volf ... other authors

Year: 2020, PLOS ONE

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Suicidal Leishmania

Lucie Podešvová, T Lestinova, E Horakova, J Lukes, P Volf, Vyacheslav Yurchenko ... other authors

Year: 2020, PATHOGENS

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The catalytic domain of the histone methyltransferase NSD2/MMSET is required for the generation of B1 cells in mice

Marc-Werner Dobenecker, Jonas Marcello, Annette Becker, Eugene Rudensky, Natarajan V. Bhanu, Thomas Carrol, Benjamin A. Garcia, Rabinder Prinjha, Alexander Tarakhovsky, Vyacheslav Yurchenko ... other authors

Year: 2020, FEBS LETTERS

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The Cryptic Plastid of Euglena longa Defines a New Type of Nonphotosynthetic Plastid Organelle

Zoltán Füssy, Kristína Záhonová, Aleš Tomčala, Juraj Krajčovič, Vyacheslav Yurchenko, Miroslav Oborník, Marek Eliáš ... other authors

Year: 2020, mSphere

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The first non-LRV RNA virus in Leishmania

Danyil Grybchuk, Diego Henrique Macedo, Y Kleschenko, Natalia Kraeva, AN Lukashev, PA Bates, P Kulich, T Lestinova, P Volf, Aleksei Kostygov, Vyacheslav Yurchenko ... other authors

Year: 2020, VIRUSES

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Vickermania gen. nov., trypanosomatids that use two joined flagella to resist midgut peristaltic flow within the fly host

Aleksei Kostygov, Alexander O. Frolov, Marina N. Malysheva, Anna I. Ganyukova, Lyudmila V. Chistyakova, Dari Tashyreva, Martina Tesařová, Viktoriia SPODAREVA, Jana Režnarová, Diego Henrique Macedo, Anzhelika Butenko, Claudia M. dAvila-Levy, Julius Lukeš, Vyacheslav Yurchenko ... other authors

Year: 2020, BMC Biology

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An enigmatic catalase of Blastocrithidia

Claretta Bianchi, Aleksei Kostygov, Natalia Kraeva, K Zahonova, E Horakova, R Sobotka, J Lukes, Vyacheslav Yurchenko ... other authors

Year: 2019, Molecular and Biochemical Parasitology

journal article

Causes and Effects of Loss of Classical Nonhomologous End Joining Pathway in Parasitic Eukaryotes

A Nenarokova, K Zahonova, M Krasilnikova, O Gahura, R McCulloch, A Zikova, Vyacheslav Yurchenko, J Lukes ... other authors

Year: 2019, mBio

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Cell Cycle-Dependent Flagellar Disassembly in a Firebug Trypanosomatid Leptomonas pyrrhocoris

Cynthia Y. He, Adarsh Singh, Vyacheslav Yurchenko

Year: 2019, mBio

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Comparative genomics of Leishmania (Mundinia)

Anzhelika Butenko, Aleksei Kostygov, J. Sádlová, Y. Kleschenko, T. Bečvář, Lucie Podešvová, Diego Henrique Macedo, David ŽIHALA, J. Lukeš, P. A. Bates, P. Volf, F. R. Opperdoes, Vyacheslav Yurchenko ... other authors

Year: 2019, BMC Genomics

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Development of Phytomonas lipae sp. n. (Kinetoplastea: Trypanosomatidae) in the true bug Coreus marginatus (Heteroptera: Coreidae) and insights into the evolution of life cycles in the genus Phytomonas

AO Frolov, MN Malysheva, AI Ganyukova, Viktoriia Spodareva, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2019, PLoS One

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Genomic Variation among Strains of Crithidia bombi and C. expoeki

E Gerasimov, N Zemp, R Schmid-Hempel, P Schmid-Hempel, Vyacheslav Yurchenko

Year: 2019, mSphere

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High Prevalence and Endemism of Trypanosomatids on a Small Caribbean Island

J Votypka, P Kment, E Kriegova, MJA Vermeij, PJ Keeling, Vyacheslav Yurchenko, J Lukes ... other authors

Year: 2019, Journal of Eukaryotic Mikrobiology

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Insect trypanosomatids in Papua New Guinea: high endemism and diversity

Jana Králová, Anastasiia Grybchuk-Ieremenko, J Votypka, V Novotny, P Kment, J Lukes, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2019, INTERNATIONAL JOURNAL FOR PARASITOLOGY

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LmxM.22.0250-Encoded Dual Specificity Protein/Lipid Phosphatase Impairs Leishmania mexicana Virulence In Vitro

Natalia Kraeva, T. Lestinova, Aygul Ishemgulova , K. Majerova, Anzhelika Butenko, S. Vaselek, J. Bespyatykh, Arzuv Charyyeva, T. Spitzova, Aleksei Kostygov, J. Lukes, P. Volf, J. Votypka, Vyacheslav Yurchenko ... other authors

Year: 2019, Pathogens

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Molecular characterization of Leishmania RNA virus 2 in Leishmania major from Uzbekistan

Y. Kleschenko, Danyil Grybchuk, N. S. Matveeva, Diego Henrique Macedo, E. N. Ponirovsky, A. N. Lukashev, Vyacheslav Yurchenko ... other authors

Year: 2019, Genes

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On monoxenous trypanosomatids from lesions of immunocompetent patients with suspected cutaneous leishmaniasis in Iran

Aleksei Kostygov, Anzhelika Butenko, Vyacheslav Yurchenko

Year: 2019, TROPICAL MEDICINE & INTERNATIONAL HEALTH

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Recent advances in trypanosomatid research: genome organization, expression, metabolism, taxonomy and evolution

DA Maslov, FR Opperdoes, Aleksei Kostygov, H Hashimi, Lukes J, Vyacheslav Yurchenko ... other authors

Year: 2019, PARASITOLOGY

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Recent advances in trypanosomatid research: genome organization, expression, metabolism, taxonomy and evolution

DA Maslov, FR Opperdoes, Aleksei Kostygov, H Hashimi, Lukes J, Vyacheslav Yurchenko ... other authors

Year: 2019, PARASITOLOGY

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CRISPR/Cas9 in Leishmania mexicana: A case study of LmxBTN1

Aygul Ishemgulova , J. Hlaváčová, K. Majerová, Anzhelika Butenko, J. Lukeš, J. Votýpka, P. Volf, Vyacheslav Yurchenko ... other authors

Year: 2018, PLOS ONE

journal article

Distribution of apple and blackcurrant microbiota in Lithuania and the Czech Republic

I. Vepstaite-Monstavice, J. Luksa, R. Staneviciene, Z. Strazdaite-Zieliene, Vyacheslav Yurchenko, S. Serva, E. Serviene ... other authors

Year: 2018, MICROBIOLOGICAL RESEARCH

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Diverse roles of RAD18 and Y-family DNA polymerases in tumorigenesis

Y Yang, Y. Z. Gao, A. Zlatanou, S. Tateishi, Vyacheslav Yurchenko, I. B. Rogozin, C. Vaziri ... other authors

Year: 2018, CELL CYCLE

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Diversity and evolution of anuran trypanosomes: insights from the study of European species

Viktoriia SPODAREVA, Anastasiia Grybchuk-Ieremenko, A Losev, J Votýpka, J Lukeš, Vyacheslav Yurchenko, Aleksei Kostygov ... other authors

Year: 2018, PARASITES & VECTORS

journal article

DNA polymerase eta mutational signatures are found in a variety of different types of cancer.

IB Rogozin, A Goncearenco, AG Lada, S De, Vyacheslav Yurchenko, G Nudelman, AR Panchenko, DN Cooper, YI Pavlov ... other authors

Year: 2018, CELL CYCLE

journal article

Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase

Kristína Záhonová, Romana Petrželková, M Valach, E Yazaki, DV Tikhonenkov, Anzhelika Butenko, J Janouškovec, Š Hrdá, Vladimír Klimeš, G Burger, Y Inagaki, PJ Keeling, V Hampl, Pavel Flegontov, Vyacheslav Yurchenko, Marek Eliáš ... other authors

Year: 2018, SCIENTIFIC REPORTS

journal article

Farming, slaving and enslavement: histories of endosymbioses during kinetoplastid evolution

J Harmer, Vyacheslav Yurchenko, A Nenarokova, J Lukeš, M Ginger

Year: 2018, Parasitology

journal article

High content analysis of sea buckthorn, black chokeberry, red and white currants microbiota - a pilot study

J Lukša, I Vepštaite-Monstaviče, Vyacheslav Yurchenko, S Serva, E Serviene

Year: 2018, FOOD RESEARCH INTERNATIONAL

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Influenza virus infection causes global RNAPII termination defects

N Zhao, V Sebastiano, N Moshkina, N Mena, J Hultquist, D Jimenez-Morales, YX Ma, A Rialdi, R Albrecht, R Fenouil, MT Sanchez-Aparicio, J Ayllon, S Ravisankar, B Haddad, JSY Ho, D Low, J Jin, Vyacheslav Yurchenko, RK Prinjha, A Tarakhovsky, M Squatrito, D Pinto, K Allette, M Byun, ML Smith, R Sebra, E Guccione, T Tumpey, N Krogan, B Greenbaum, H van Bakel, A Garcia-Sastre, I Marazzi ... other authors

Year: 2018, NATURE STRUCTURAL & MOLECULAR BIOLOGY

journal article

Leptomonas pyrrhocoris: genomic insight into parasite's physiology

Anzhelika Butenko, T. da Silva Vieira, A. O. Frolov, F. R. Opperdoes, R. P. Soares, Aleksei Kostygov, J. Lukeš, Vyacheslav Yurchenko ... other authors

Year: 2018, CURRENT GENOMICS

journal article

Obligate development of Blastocrithidia papi (Trypanosomatidae) in the Malpighian tubules of Pyrrhocoris apterus (Hemiptera) and coordination of host-parasite life cycles

A Frolov, M Malysheva, A Ganyukova, Vyacheslav Yurchenko, Aleksei Kostygov

Year: 2018, PLoS One

journal article

Parasites and their (endo)symbiotic microbes

Vyacheslav Yurchenko, J Lukeš

Year: 2018, Parasitology

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RNA viruses in Blechomonas (Trypanosomatidae) and evolution of Leishmaniavirus

Danyil Grybchuk, Aleksei Kostygov, Diego Henrique Macedo, J Votýpka, J Lukeš, Vyacheslav Yurchenko ... other authors

Year: 2018, MBIO

journal article

RNA viruses in trypanosomatid parasites: a historical overview

Danyil Grybchuk, Aleksei Kostygov, Diego Henrique Macedo, C. M. d Avila-Levy, Vyacheslav Yurchenko

Year: 2018, MEMORIAS DO INSTITUTO OSWALDO CRUZ

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The reduced genome of Candidatus Kinetoplastibacterium sorsogonicusi, the endosymbiont of Kentomonas sorsogonicus (Trypanosomatidae): loss of the haem synthesis pathway

F Silva, Aleksei Kostygov, Viktoriia SPODAREVA, Anzhelika Butenko, R Tossou, J Lukeš, Vyacheslav Yurchenko, J Alves ... other authors

Year: 2018, Parasitology

journal article

Trypanosomatid mitochondrial RNA editing: dramatically complex transcript repertoires revealed with a dedicated mapping tool

E.S. Gerasimov, A. A. Gasparyan, I. Kaurov, B. Tichý, M. D. Logacheva, A. A. Kolesnikov, J. Lukeš, Vyacheslav Yurchenko, S.L. Zimmer, Pavel Flegontov ... other authors

Year: 2018, NUCLEIC ACIDS RESEARCH

journal article

Trypanosomatids are much more than just trypanosomes: clues from the expanded family tree

J Lukeš, Anzhelika Butenko, H Hashimi, DA Maslov, J Votýpka, Vyacheslav Yurchenko ... other authors

Year: 2018, TRENDS IN PARASITOLOGY

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Viral discovery and diversity in trypanosomatid protozoa with a focus on relatives of the human parasite Leishmania

Year: 2018, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

journal article

Viral discovery and diversity in trypanosomatid protozoa with a focus on relatives of the human parasite Leishmania

Year: 2018, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

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A putative ATP/GTP binding protein affects Leishmania mexicana growth in insect vectors and vertebrate hosts

Aygul Ishemgulova , Natalia Kraeva, J. Hlavacova, S.L. Zimmer, Anzhelika Butenko, Lucie Podešvová, T. Lestinova, J. Lukes, Aleksei Kostygov, J. Votypka, P. Volf, Vyacheslav Yurchenko ... other authors

Year: 2017, PLoS Neglected Tropical Diseases

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Catalase in Leishmaniinae: With me or against me?

Natalia Kraeva, E. Horakova, Aleksei Kostygov, L. Koreny, Anzhelika Butenko, Vyacheslav Yurchenko, J. Lukes ... other authors

Year: 2017, INFECTION GENETICS AND EVOLUTION

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Different Metabolic Pathways Are Involved in Response of Saccharomyces cerevisiae to L-A and M Viruses

J. Luksa, B. Ravoityte, A. Konovalovas, L. Aitmanaite, Anzhelika Butenko, Vyacheslav Yurchenko, S. Serva, E. Serviene ... other authors

Year: 2017, Toxins

journal article

Extensive flagellar remodeling during the complex life cycle of Paratrypanosoma, an early-branching trypanosomatid

T. Skalický, E. Dobáková, R.J. Wheeler, M. Tesařová, Pavel Flegontov, D. Jirsová, J. Votýpka, Vyacheslav Yurchenko, F.J. Ayala, J. Lukeš ... other authors

Year: 2017, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

journal article

Genome of Ca. Pandoraea novymonadis, an Endosymbiotic Bacterium of the Trypanosomatid Novymonas esmeraldas

Aleksei Kostygov, Anzhelika Butenko, A. Nenarokova, D. Tashyreva, Pavel Flegontov, J. Lukes, Vyacheslav Yurchenko ... other authors

Year: 2017, Frontiers in Microbiology

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Inducible protein stabilization system in Leishmania mexicana

Lucie Podešvová, H. Huang, Vyacheslav Yurchenko

Year: 2017, MOLECULAR AND BIOCHEMICAL PARASITOLOGY

journal article

Life cycle of Blastocrithidia papi sp n. (Kinetoplastea, Trypanosomatidae) in Pyrrhocoris apterus (Hemiptera, Pyrrhocoridae)

A. O. Frolov, M.N. Malysheva, A.I. Ganyukova, Vyacheslav Yurchenko, Aleksei Kostygov

Year: 2017, EUROPEAN JOURNAL OF PROTISTOLOGY

journal article

Molecular mechanisms of thermal resistance of the insect trypanosomatid Crithidia thermophilal

Aygul Ishemgulova , Anzhelika Butenko, Lucie Kortišová, C. Boucinha, Anastasiia Grybchuk-Ieremenko, K.A. Morelli, M. Tesarova, Natalia Kraeva, Danyil Grybchuk, Tomáš Pánek, Pavel Flegontov, J. Lukes, J. Votypka, M.G. Pavan, F.R. Opperdoes, Viktoriia SPODAREVA, C.M. dAvila-Levy, Aleksei Kostygov, Vyacheslav Yurchenko ... other authors

Year: 2017, PLoS One

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Revised classification of the subfamily Leishmaniinae (Trypanosomatidae)

Aleksei Kostygov, Vyacheslav Yurchenko

Year: 2017, FOLIA PARASITOLOGICA

journal article

An Unprecedented Non-canonical Nuclear Genetic Code with All Three Termination Codons Reassigned as Sense Codons

Kristína Záhonová, Aleksei Kostygov, Tereza Ševčíková, Vyacheslav Yurchenko, Marek Eliáš

Year: 2016, CURRENT BIOLOGY

journal article

Back to monoxeny: Phytomonas nordicus descended from dixenous plant parasites

A. O. Frolov, M. N. Malysheva, Vyacheslav Yurchenko, Aleksei Kostygov

Year: 2016, EUROPEAN JOURNAL OF PROTISTOLOGY

journal article

Comparative Metabolism of Free-living Bodo saltans and Parasitic Trypanosomatids

F. R. Opperdoes, Anzhelika Butenko, Pavel Flegontov, Vyacheslav Yurchenko, J. Lukes

Year: 2016, JOURNAL OF EUKARYOTIC MICROBIOLOGY

journal article

Diversity of Trypanosomatids in Cockroaches and the Description of Herpetomonas tarakana sp n.

Vyacheslav Yurchenko, Aleksei Kostygov, J. Havlova, Anastasiia Grybchuk-Ieremenko, Tereza Ševčíková, J. Lukes, Jan Ševčík, J. Votypka ... other authors

Year: 2016, JOURNAL OF EUKARYOTIC MICROBIOLOGY

journal article

Genome of Leptomonas pyrrhocoris: a high-quality reference for monoxenous trypanosomatids and new insights into evolution of Leishmania

Pavel Flegontov, Anzhelika Butenko, S. Firsov, Natalia Kraeva, Marek Eliáš, M. C. Field, D. Filatov, O. Flegontova, E. S. Gerasimov, J. Hlavacova, Aygul ISHEMGULOVA, A. P. Jackson, S. Kelly, Aleksei Kostygov, M.D. Logacheva, D. A. Maslov, F. R. Opperdoes, A. OReilly, J. Sadlova, Tereza Ševčíková, D. Venkatesh, C. Vlcek, P. Volf, J. Votypka, Kristína Záhonová, Vyacheslav Yurchenko, J. Lukes ... other authors

Year: 2016, SCIENTIFIC REPORTS

journal article

Novel Trypanosomatid-Bacterium Association: Evolution of Endosymbiosis in Action

Aleksei Kostygov, E. Dobakova, Anastasiia Grybchuk-Ieremenko, Dalibor VÁHALA, D. Maslov, J. Votypka, J. Lukes, Vyacheslav Yurchenko ... other authors

Year: 2016, MBIO

journal article

Protist Collections: Essential for Future Research

C. M. dAvila-Levy, Vyacheslav Yurchenko, J. Votypka, P. Grellier

Year: 2016, TRENDS IN PARASITOLOGY

journal article

RuBisCO in Non-Photosynthetic Alga Euglena longa: Divergent Features, Transcriptomic Analysis and Regulation of Complex Formation

Kristína Záhonová, Z. Fussy, M. Obornik, Marek Eliáš, Vyacheslav Yurchenko

Year: 2016, PLOS ONE

journal article

T7 polymerase-driven transcription is downregulated in metacyclic promastigotes and amastigotes of Leishmania mexicana

Aygul ISHEMGULOVA, Natalia Kraeva, D. Faktorova, Lucie Podešvová, J. Lukes, Vyacheslav Yurchenko ... other authors

Year: 2016, FOLIA PARASITOLOGICA

journal article

Exploring the environmental diversity of kinetoplastid flagellates in the high-throughput DNA sequencing era

C. M. dAvila-Levy, C. Boucinha, Aleksei Kostygov, H. L. C. Santos, K.A. Morelli, Anastasiia Grybchuk-Ieremenko, L. Duval, J. Votypka, Vyacheslav Yurchenko, P. Grellier, J. Lukes ... other authors

Year: 2015, Memórias do Instituto Oswaldo Cruz

journal article

Host specificity, pathogenicity, and mixed infections of trypanoplasms from freshwater fishes

Alexander Losev, Anastasiia Grybchuk-Ieremenko, Aleksei Kostygov, J. Lukes, Vyacheslav Yurchenko

Year: 2015, PARASITOLOGY RESEARCH

journal article

Host-specificity of monoxenous trypanosomatids: statistical analysis of the distribution and transmission patterns of the parasites from Neotropical Heteroptera

E. Kozminsky, Natalia Kraeva, Aygul Ishemgulova, E. Dobáková, J. Lukeš, P. Kment, Vyacheslav Yurchenko, J. Votýpka, D.A. Maslov ... other authors

Year: 2015, PROTIST

journal article

Infection dynamics and immune response in a newly described Drosophila-trypanosomatid association

P.T. Hamilton, J. Votypka, A. Dostálová, Vyacheslav Yurchenko, N.H. Bird, J. Lukeš, B. Lemaitre, S.J. Perlman ... other authors

Year: 2015, mBio

journal article

Leptomonas seymouri: Adaptations to the Dixenous Life Cycle Analyzed by Genome Sequencing, Transcriptome Profiling and Co-infection with Leishmania donovani

Year: 2015, PLoS Pathogens

journal article

New approaches to systematics of Trypanosomatidae: criteria for taxonomic (re)description

J. Votýpka, C.M. dAvila-Levy , P. Grellier, D.A. Maslov, J. Lukeš, Vyacheslav Yurchenko ... other authors

Year: 2015, TRENDS IN PARASITOLOGY

journal article

výzkumný pobyt

Vyacheslav Yurchenko

Year: 2015

work experience abroad

A small portion of plastid transcripts is polyadenylated in the flagellate Euglena gracilis

Kristína Záhonová, L. Hadariová , R. Vacula , Vyacheslav Yurchenko, Marek Eliáš, J. Krajčovič , Matej Vesteg ... other authors

Year: 2014, FEBS LETTERS

journal article

Evolution of parasitism in kinetoplastid flagellates

J. Lukeš, T. Skalický , J. Týč , J. Votýpka , Vyacheslav Yurchenko

Year: 2014, MOLECULAR AND BIOCHEMICAL PARASITOLOGY

journal article

High prevalence of trypanosome co-infections in freshwater fishes

Anastasiia Grybchuk-Ieremenko, Alexander Losev, Alexei Kostygov, J. Lukeš, Vyacheslav Yurchenko

Year: 2014, FOLIA PARASITOLOGICA

journal article

Kentomonas gen. n., a new genus of endosymbiont-containing trypanosomatids of Strigomonadinae subfam. n.

J. Votýpka, Alexei Kostygov, Natalia Kraeva, Anastasiia Grybchuk-Ieremenko, M. Tesařová, Danyil Grybchuk, J. Lukeš, Vyacheslav Yurchenko ... other authors

Year: 2014, PROTIST

journal article

Molecular revision of the genus Wallaceina

A. Kostygov, Anastasiia Grybchuk-Ieremenko, M. N. Malysheva, A. O. Frolov, Vyacheslav Yurchenko

Year: 2014, PROTIST

journal article

Reisolation and redescription of Balantidium duodeni Stein, 1867 (Litostomatea, Trichostomatia)

L. V. Chistyakova, Alexei Kostygov, O. A. Kornilova, Vyacheslav Yurchenko

Year: 2014, PARASITOLOGY RESEARCH

journal article

Tetracycline-inducible gene expression system in Leishmania mexicana

Natalia Kraeva, Aygul Ishemgulova, J. Lukeš , Vyacheslav Yurchenko

Year: 2014, MOLECULAR AND BIOCHEMICAL PARASITOLOGY

journal article

Ultrastructure and molecular phylogeny of four new species of monoxenous trypanosomatids from flies (Diptera: Brachycera) with redefinition of the genus Wallaceina

Vyacheslav Yurchenko, J. Votýpka, M. Tesařová , H. Klepetková , Natalia Kraeva, M. Jirků , J. Lukeš ... other authors

Year: 2014, FOLIA PARASITOLOGICA

journal article

Diversity and phylogeny of insect trypanosomatids: all that is hidden shall be revealed

D.A. Maslov, J. Votypka, Vyacheslav Yurchenko, J. Lukes

Year: 2013, TRENDS PARASITOL

journal article

Diversity of trypanosomatids (Kinetoplastea: Trypanosomatidae) parasitizing fleas (Insecta: Siphonaptera) and description of a new genus Blechomonas gen. n.

J. Votýpka, E. Suková, Natalia Kraeva, Aygul Ishemgulova, I. Duží, J. Lukeš, Vyacheslav Yurchenko ... other authors

Year: 2013, PROTIST

journal article

New Species of Insect Trypanosomatids from Costa Rica and the Proposal for a New Subfamily within the Trypanosomatidae

Milan Jirků, Vyacheslav Yurchenko, Julius Lukeš, Dmitri A. Maslov

Year: 2012, J EUKARYOT MICROBIOL

journal article

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Subject

ANGB3

Angličtina studovaného oboru 3

MMBPF

Moderní metody v molekulární biologii a

PRS01

Specializační seminář 1

PRS02

Specializační seminář 2

PRS03

Specializační seminář 3

PRS04

Specializační seminář 4

PRS05

Specializační seminář 5

PRS06

Specializační seminář 6

PRS07

Specializační seminář 7

PRS08

Specializační seminář 8

PRS09

Specializační seminář 9

PRS10

Specializační seminář 10

PRS11

Specializační seminář 11

PRS12

Specializační seminář 12

QCII1

Článek v index. imp. časopise 1

QCII2

Článek v index. imp. časopise 2

QCII3

Článek v index. imp. časopise 3

QCIN1

Článek v index. neimp. časopise 1

QCIN2

Článek v index. neimp. časopise 2

QCIN3

Článek v index. neimp. časopise 3

QMMMG

Moderní metody v molekulární biologii a

QMVK1

Akt. účast na mezinár. vědecké konf. 1

QMVK2

Akt. účast na mezinár. vědecké konf. 2

QMVK3

Akt. účast na mezinár. vědecké konf. 3

QNVK1

Akt. účast na národní vědecké konf. 1

QNVK2

Akt. účast na národní vědecké konf. 2

QNVK3

Akt. účast na národní vědecké konf. 3

QOTKA

Práce s odbornými texty a komunik. v AJ

QVYC1

Výuková činnost 1

QVYC2

Výuková činnost 2

QZMVP

Zapojení do mezinárodního výzk. projektu

QZNVP

Zapojení do národního výzk. projektu

QZPD2

Zahraniční studijní pobyt dlouhodobý

QZSPD

Zahraniční studijní pobyt dlouhodobý

QZSPK

Zahraniční studijní pobyt krátkodobý

QZSPS

Zahraniční studijní pobyt střednědobý

WKOAN

Scientific communication in English

WMMMG

Modern methods in molecular biology

6MFL2

Modern Foreign Language 2

6MFL4

Modern Foreign Language 4

7ANG3

Angličtina studovaného oboru 3

7BAPR

Bakalářská práce

7DIPR

Diplomová práce

7FUGE

Fundamentals of genetics and genomics

7KOAN

Odborná komunikace v angličtině

7MMMG

Mod. metody v molekulární Bi a genomice

7PARA

Parazitologie

7PBP2

Příprava bakalářské práce 2

7PDP1

Příprava diplomové práce 1

7PDP2

Příprava diplomové práce 2

7SDP1

Seminář k diplomové práci 1

7SDP2

Seminář k diplomové práci 2

7SEM1

Specializovaný diplomový seminář 1

7SEM2

Specializovaný diplomový seminář 2

7SEM3

Specializovaný diplomový seminář 3

8MMMG

Modern methods in mol. bio. and genom.

8OTKA

Práce s odb. texty a komunikace v anj.

8SWAC

Scientific writing and communication

SDZPK

Státní doktorská zkouška

SDZPP

Státní doktorská zkouška

Author

Title

Type of thesis

Year

Bykova Anastasiia

The role of various types of mutations in evolution of SARS-CoV genomes

Doctoral thesis

2024

Chmelová Ľubomíra

Insights into biochemistry of trypanosomatids

Doctoral thesis

2024

Da Silva Albanaz Amanda Tábita

Comparative genomics of Trypanosomatidae: from model organisms to outliers

Doctoral thesis

2023

Zakharova Alexandra

The inner society of endosymbionts in Leishmaniinae

Doctoral thesis

2023

Bianchi Claretta

Catalase: what happened in the evolution of Trypanosomatidae?

Doctoral thesis

2022

Charyyeva Arzuv

Leishmania virulence: from haplotype network to functional genomics

Doctoral thesis

2021

Fagundes Macedo Diego Henrique

Jumping in the viral bandwagon: A study on the diversity and evolution of RNA viruses in trypanosomatids with the emphasis on leishmaniaviruses

Doctoral thesis

2021

Podešvová Lucie

The new molecular tools for Leishmania research

Doctoral thesis

2020

Grybchuk Danyil

Diversity and phylogeny of RNA viruses in Trypanosomatidae with insights into viral ecology and host cell interaction

Doctoral thesis

2017

Ieremenko Anastasiia

Diversity and molecular phylogeny of monoxenous insect trypanosomatids and trypanosomes from freshwater vertebrates

Doctoral thesis

2017

Ishemgulova Aygul

Functional genomics of Leishmania Virulence

Doctoral thesis

2017

Kraeva Natalia

Analysis of genetic differences between monoxenous and dixenous Leishmaniinae for identification of novel virulence factors

Doctoral thesis

2017

Warmusová Sandra

Genetic manipulations of Novymonas esmeraldas

Master's thesis

2022

Děmbickaja Alena

Non-Homologues End Joining in Leishmania

Master's thesis

2019

Kovačik Martin

Differencial secretion of cyclophilin 19 in Leishmania mexicana

Master's thesis

2018

Poláková Ester

Endo/exo/phosphatase in Leishmania

Master's thesis

2018

Mlacovská Denisa

Regulation of gene expression in Trypanosomatidae

Master's thesis

2017

Režnarová Jana

Biodiversity of monoxenous trypanosomatids

Master's thesis

2017

Volná Adriana

Catalase in monoxenous trypanosomatids

Master's thesis

2017

Kortišová Lucie

Molecular mechanisms of thermal resistance in monoxenous Trypanosomatidae.

Master's thesis

2015

Váhala Dalibor

Systematics and phylogeny of monoxenous Trypanosomatidae

Master's thesis

2015

Děmbickaja Alena

Immune response against Leishmania infection

Bachelor's thesis

2017

Poláková Ester

Leishmania infectivity

Bachelor's thesis

2016

Mičánek Michal

Biology of protozoans of the groups Jakobida and Malawimonadida

Bachelor's thesis

2014

Viruses of trypanosomatids: maintenance and transmission

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2024 - 12/2026

Provider

Standardní projekt GA ČR

State

solved

Study of the anti-leishmanial activity of nanoparticles considering their effect on the microbiome

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

2/2024 - 1/2026

Provider

Horizont Europe

State

solved

Telomere biology of trypanosomatids: contrasting features point to diverse strategies

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2023 - 12/2025

Provider

Standardní grantový projekt GA AV

State

solved

Biochemie trypanosomatid: pohled ze strany přehlížených druhů

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

7/2022 - 6/2025

Provider

INTER-ACTION

State

solved

RNA editing in non-model flagellates

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2022 - 12/2024

Provider

Standardní projekt GA ČR

State

solved

Blastocrithidia and Trypanosoma as optimal models for testing the emergence and features of alternative genetic codes

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2022 - 12/2024

Provider

Standardní projekt GA ČR

State

solved

The role alternative oxidases in Trypanosomatidae

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

6/2023 - 1/2024

Provider

Ostatní projekty ze zahr. prostředků

State

finished

A survey of Pyrrhocoris apterus parasites in Austria with a focus on monoxenous trypanosomatids

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

7/2023 - 12/2023

Provider

Mezinárodní spolupráce

State

finished

Catalase: to be or not to be in two hosts

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2021 - 12/2023

Provider

Standardní grantový projekt GA AV

State

finished

A patchwork quilt of molecular projects

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2023 - 12/2023

Provider

Specifický VŠ výzkum

State

finished

Teaching virology in Czechia: lessons from HIV research guru

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

2/2023 - 12/2023

Provider

Katedra biologie a ekologie

State

finished

Trypanosomatids are much more than just trypanosomes: insights from outliers

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2020 - 6/2023

Provider

Standardní projekt GA ČR

State

finished

Centre for research of pathogenicity and virulence of parasites

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

3/2018 - 12/2022

Provider

Katedra biologie a ekologie, Operační program Výzkum, vývoj a vzdělávání (OP VVV)

State

finished

Evolutionary genomics of model and non-model species

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2022 - 12/2022

Provider

Specifický VŠ výzkum

State

finished

Leishmaniaviruses in trypanosomatids

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2020 - 12/2022

Provider

Standardní projekt GA ČR

State

finished

A survey of Pyrrhocoris apterus parasites in Austria with a focus on monoxenous trypanosomatids

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

7/2022 - 12/2022

Provider

Action

State

finished

Protist biology: from genomics to function

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2021 - 12/2021

Provider

Specifický VŠ výzkum

State

finished

Biology of protists: modern approaches

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2020 - 12/2020

Provider

Specifický VŠ výzkum

State

finished

Trypanosomatids with in-frame sense stop codons: dissecting molecular mechanisms behind the unique ambiguity of the genetic code

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2018 - 12/2020

Provider

Katedra biologie a ekologie, Standardní projekt GA ČR

State

finished

Whole genome analysis in modern biology

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2019 - 12/2019

Provider

Specifický VŠ výzkum

State

finished

Functional genomics of Leishmania virulence

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2017 - 12/2019

Provider

Katedra biologie a ekologie, Standardní projekt GA ČR

State

finished

Salivary proteins of Sergentomyia schwetzi sand flies

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2017 - 12/2019

Provider

Katedra biologie a ekologie, Standardní projekt GA ČR

State

finished

Evolutionary and functional genomic in selected biological systems

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2018 - 12/2018

Provider

Specifický VŠ výzkum

State

finished

Heme: a putative master regulator in trypanosomatids

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2016 - 12/2018

Provider

Katedra biologie a ekologie, Standardní projekt GA ČR

State

finished

Life Science Research Centre: stabilization and new perspectives

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

7/2016 - 12/2017

Provider

Katedra biologie a ekologie, Projekty podporované z rozpočtu měst krajských úřadů

State

finished

Of viruses and men: how post-genome biology can help answering fundamental questions of evolution

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2017 - 12/2017

Provider

Specifický VŠ výzkum

State

finished

Virulent factors in Trypanosomatidae

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2016 - 12/2016

Provider

Specifický VŠ výzkum

State

finished

Analysis of virulence factors involved in Leishmania infection

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2015 - 6/2016

Provider

Katedra biologie a ekologie, Projekty podporované z rozpočtu měst krajských úřadů

State

finished

Evolution of parasitism in Trypanosomatidae

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2015 - 12/2015

Provider

Specifický VŠ výzkum

State

finished

Origin of dixenous life cycle in Trypanosomatidae

Main solver

prof. MSc. Vjačeslav Jurčenko, Ph.D.

Period

1/2014 - 12/2014

Provider

Specifický VŠ výzkum

State

finished

Vjačeslav Jurčenko

Basic information

CV

Publications

Teaching

Supervised theses

Projects

Department of Biology and Ecology