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UO > About > Organizational Structure > Faculties & Institutes > Faculty of Science > About > Organizational Structure > Departments & Centres > Department of Biology and Ecology

Martin Bartas

Martin Bartas

Academic degree, name, surname:
Mgr. et Mgr. Martin Bartas, Ph.D.
Room, floor, building:
Position:
Research interests and teaching:
Department (Faculty):
Department of Biology and Ecology (Faculty of Science)
Phone number, mobile:
+420 553 46 2330
E-mail:



No record found.



Searching for New Z-DNA/Z-RNA Binding Proteins Based on Structural Similarity to Experimentally Validated Zα Domain
Martin Bartas, Kristyna Slychko, Jiří Červeň, Christopher A. Beaudoin, Tom L. Blundell, Petr Pečinka, Václav Brázda ... other authors
Year: 2022, International Journal of Molecular Sciences
journal article
 
Unheeded SARS-CoV-2 proteins? A deep look into negative-sense RNA
Martin Bartas, Adriana Volná, Christopher A. Beaudoin, Ebbe Toftgaard Poulsen, Jiří Červeň, Václav Brázda, Vladimír Špunda, Tom L. Blundell, Petr Pečinka ... other authors
Year: 2022, Briefings in Bioinformatics
journal article
 
Amino Acid Composition in Various Types of Nucleic Acid-Binding Proteins
Martin Bartas, Jiří Červeň, Simona Guziurová, Kristyna Slychko, Petr Pečinka
Year: 2021, International Journal of Molecular Sciences
journal article
 
Evolution of Diverse Strategies for Promoter Regulation
Václav Brázda, Martin Bartas, Richard Bowater
Year: 2021, Trends in Genetics
journal article
 
Letter to the Editor: Significant mutation enrichment in inverted repeat sites of new SARS-CoV-2 strains
Martin Bartas, Jiří Červeň, Adriana Volná, Miroslav Fojta, Václav Brázda, Petr Pečinka ... other authors
Year: 2021, BRIEF BIOINFORM
journal article
 
The Changes in the p53 Protein across the Animal Kingdom Point to Its Involvement in Longevity
Martin Bartas, Václav Brázda, Adriana Volná, Jiří Červeň, Petr Pečinka, Joanna Zawacka-Pankau ... other authors
Year: 2021, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
journal article
 
In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles
Martin Bartas, Václav Brázda, Natália Bohálová, Alessio Cantara, Adriana Volná, Tereza STACHUROVÁ, Kateřina Malachová, Eva Jagelská, Otília Porubiaková, Jiří Červeň, Petr Pečinka ... other authors
Year: 2020, Frontiers in Microbiology
journal article
 
The Presence and Localization of G-Quadruplex Forming Sequences in the Domain of Bacteria
Martin Bartas, Michaela Čutová, Václav Brázda, Patrik Kaura, Jiří Šťastný, Jan Kolomazník, Jan Coufal, Pratik Goswami, Jiří Červeň, Petr Pečinka ... other authors
Year: 2019, Molecules
journal article
 
Bioinformatics analyses and in vitro evidence for five and six stacked G-quadruplex forming sequences
Martin Bartas, Václav Brázda, Václav Karlický, Jiří Červeň, Petr Pečinka
Year: 2018, BIOCHIMIE
journal article
 

RNA analysis of the longest living vertebrate Greenland shark revealed an abundance of LINE-like elements in its transcriptome
Martin Bartas, Jiří Červeň, Natália Valková, Adriana Volná, Michaela Dobrovolná, Lucie Šislerová, Hörður Baldvinsson, Petr Pečinka, Václav Brázda ... other authors
Year: 2024, CZECH POLAR REPORTS
journal article
 
Analysis of G-Quadruplex-Forming Sequences in Drought Stress-Responsive Genes, and Synthesis Genes of Phenolic Compounds in Arabidopsis thaliana
Petr Pečinka, Natália Bohálová, Adriana Volná, Kristýna Kundrátová, Václav Brázda, Martin Bartas ... other authors
Year: 2023, Life
journal article
 
Beyond the Primary Structure of Nucleic Acids: Potential Roles of Epigenetics and Noncanonical Structures in the Regulations of Plant Growth and Stress Responses
Adriana Volná, Martin Bartas, Jakub Nezval, Radomír Pech, Petr Pečinka, Vladimír Špunda, Jiří Červeň ... other authors
Year: 2023, Humana Press
specialist book chapter
 
BEYOND THE PRIMARY STRUCTURE OF NUCLEIC ACIDS: THE ROLE OF EPIGENETICS AND QUADRUPLEX FORMING STRUCTURES IN STRESS RESPONSES
Adriana Volná, Martin Bartas, Jakub Nezval, Radomír Pech, Petr Pečinka, Vladimír Špunda, Jiří Červeň ... other authors
Year: 2023
presentations (congresses, symposia, conferences, workshops)
 
Extensive Bioinformatics Analyses Reveal a Phylogenetically Conserved Winged Helix (WH) Domain (Zτ) of Topoisomerase IIα, Elucidating Its Very High Affinity for Left-Handed Z-DNA and Suggesting Novel Putative Functions
Martin Bartas, Kristyna Slychko, Jiří Červeň, Petr Pečinka, Donna J. Arndt-Jovin, Thomas M. Jovin ... other authors
Year: 2023, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
journal article
 
Extensive Bioinformatics Analyses Reveal a Phylogenetically Conserved Winged Helix (WH) Domain (Zτ) of Topoisomerase IIα, Elucidating Its Very High Affinity for Left-Handed Z-DNA and Suggesting Novel Putative Functions
Martin Bartas, Kristyna Slychko, Jiří Červeň, Petr Pečinka, Donna Jovin, Jovin Thomas ... other authors
Year: 2023, International Journal of Molecular Sciences
journal article
 
Identification of annotation artifacts concerning the chalcone synthase (CHS)
Martin Bartas, Adriana Volná, Jiří Červeň, Boas Pucker
Year: 2023, BMC Research Notes
journal article
 
New Low Morphine Opium Poppy Genotype Obtained by TILLING Approach
Jiří Červeň, Martin Bartas, Petr Pečinka, viktor vrbovský, Jiří Horáček, Lenka ENDLOVÁ, Vladislav Čurn ... other authors
Year: 2023, Plants-Basel
journal article
 
Variability of Inverted Repeats in All Available Genomes of Bacteria
Otília Porubiaková, Jan Havlík, . Indu, Michal Šedý, Veronika Přepechalová, Martin Bartas, Stefan Bidula, Jiří Šťastný, Miroslav Fojta, Václav Brázda ... other authors
Year: 2023, MICROBIOLOGY SPECTRUM
journal article
 
Are There Hidden Genes in DNA/RNA Vaccines?
Christopher A. Beaudoin, Martin Bartas, Adriana Volná, Petr Pečinka, Tom L. Blundell
Year: 2022, Frontiers in Immunology
journal article
 
Regulation of Phenolic Compound Production by Light Varying in Spectral Quality and Total Irradiance
Radomír Pech, Adriana Volná, Lena Hunt, Martin Bartas, Jiří Červeň, Petr Pečinka, Vladimír Špunda, Jakub Nezval ... other authors
Year: 2022, International Journal of Molecular Sciences
journal article
 
Searching for New Z-DNA/Z-RNA Binding Proteins Based on Structural Similarity to Experimentally Validated Zα Domain
Martin Bartas, Kristyna Slychko, Jiří Červeň, Christopher A. Beaudoin, Tom L. Blundell, Petr Pečinka, Václav Brázda ... other authors
Year: 2022, International Journal of Molecular Sciences
journal article
 
Searching for New Z-DNA/Z-RNA Binding Proteins Based on Structural Similarity to Experimentally Validated Zα Domain
Martin Bartas, Kristyna Slychko, Jiří Červeň, Christopher A. Beaudoin, Tom L. Blundell, Petr Pečinka, Václav Brázda ... other authors
Year: 2022, International Journal of Molecular Sciences
journal article
 
The Newly Sequenced Genome of Pisum sativum Is Replete with Potential G-Quadruplex-Forming Sequences-Implications for Evolution and Biological Regulation
Michaela Dobrovolná, Martin Bartas, Adriana Volná, Jean-Louis Mergny, Jiawei Wang, Václav Brázda, Natálie Bohálová, Vratislav Peška ... other authors
Year: 2022, International Journal of Molecular Sciences
journal article
 
Unheeded SARS-CoV-2 proteins? A deep look into negative-sense RNA
Martin Bartas, Adriana Volná, Christopher A. Beaudoin, Ebbe Toftgaard Poulsen, Jiří Červeň, Václav Brázda, Vladimír Špunda, Tom L. Blundell, Petr Pečinka ... other authors
Year: 2022, Briefings in Bioinformatics
journal article
 
Unheeded SARS-CoV-2 proteins? A deep look into negative-sense RNA
Martin Bartas, Adriana Volná, Christopher A. Beaudoin, Ebbe Toftgaard Poulsen, Jiří Červeň, Václav Brázda, Vladimír Špunda, Tom L. Blundell, Petr Pečinka ... other authors
Year: 2022, Briefings in Bioinformatics
journal article
 
What Do We Know about Barley miRNAs?
Adriana Volná, Martin Bartas, Petr Pečinka, Vladimír Špunda, Jiří Červeň
Year: 2022, International Journal of Molecular Sciences
journal article
 
Amino Acid Composition in Various Types of Nucleic Acid-Binding Proteins
Martin Bartas, Jiří Červeň, Simona Guziurová, Kristyna Slychko, Petr Pečinka
Year: 2021, International Journal of Molecular Sciences
journal article
 
Amino Acid Composition in Various Types of Nucleic Acid-Binding Proteins
Martin Bartas, Jiří Červeň, Simona Guziurová, Kristyna Slychko, Petr Pečinka
Year: 2021, International Journal of Molecular Sciences
journal article
 
Analyses of viral genomes for G-quadruplex forming sequences reveal their correlation with the type of infection
Natália Bohálová, Alessio Cantara, Martin Bartas, Patrik Kaura, Jiří Šťastný, Petr Pečinka, Miroslav Fojta, Jean-Louis Mergny, Václav Brázda ... other authors
Year: 2021, BIOCHIMIE
journal article
 
Beta-lactam resistance development during the treatment processes of municipal wastewater treatment plants
Tereza Stachurová, Hana Piková, Martin Bartas, Jaroslav Semerád, Kateřina Svobodová, Kateřina Malachová ... other authors
Year: 2021, CHEMOSPHERE
journal article
 
Evolution of Diverse Strategies for Promoter Regulation
Václav Brázda, Martin Bartas, Richard Bowater
Year: 2021, Trends in Genetics
journal article
 
G-Quadruplex in Gene Encoding Large Subunit of Plant RNA Polymerase II: A Billion-Year-Old Story
Adriana Volná, Martin Bartas, Václav Karlický, Jakub Nezval, Kristýna Kundrátová, Petr Pečinka, Vladimír Špunda, Jiří Červeň ... other authors
Year: 2021, INT J MOL SCI
journal article
 
G-Quadruplex in Gene Encoding Large Subunit of Plant RNA Polymerase II: A Billion-Year-Old Story
Adriana Volná, Martin Bartas, Václav Karlický, Jakub Nezval, Kristýna Kundrátová, Petr Pečinka, Vladimír Špunda, Jiří Červeň ... other authors
Year: 2021, INT J MOL SCI
journal article
 
G-quadruplexes in H1N1 influenza genomes
Václav Brázda, Otília Porubiaková, Allesio Cantara, Natália Bohálová, Jan Coufal, Martin Bartas, Miroslav Fojta, Jean Louis Mergny ... other authors
Year: 2021, BMC Genomics
journal article
 
Letter to the Editor: Significant mutation enrichment in inverted repeat sites of new SARS-CoV-2 strains
Martin Bartas, Jiří Červeň, Adriana Volná, Miroslav Fojta, Václav Brázda, Petr Pečinka ... other authors
Year: 2021, BRIEF BIOINFORM
journal article
 
SARS-CoV-2 hot-spot mutations are significantly enriched within inverted repeats and CpG island loci
Pratik Goswami, Martin Bartas, Matej Lexa, Natalia Bohalova, Adriana Volná, Jiří Červeň, Veronika Červeňová, Petr Pečinka, Vladimír Špunda, Miroslav Fojta, Václav Brázda ... other authors
Year: 2021, BRIEFINGS IN BIOINFORMATICS
journal article
 
Searching for G-Quadruplex-Binding Proteins in Plants: New Insight into Possible G-Quadruplex Regulation
Adriana Volná, Martin Bartas, Jakub Nezval, Vladimír Špunda, Petr Pečinka, Jiří Červeň ... other authors
Year: 2021, BioTech
journal article
 
The Changes in the p53 Protein across the Animal Kingdom Point to Its Involvement in Longevity
Martin Bartas, Václav Brázda, Adriana Volná, Jiří Červeň, Petr Pečinka, Joanna Zawacka-Pankau ... other authors
Year: 2021, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
journal article
 
Tracing dsDNA Virus-Host Coevolution through Correlation of Their G-Quadruplex-Forming Sequences
Natália Bohálová, Alessio Cantara, Martin Bartas, Patrik Kaura, Jiří Šťastný, Petr Pečinka, Miroslav Fojta, Václav Brázda ... other authors
Year: 2021, International Journal of Molecular Sciences
journal article
 
Transcriptomic and Proteomic Analysis of Drought Stress Response in Opium Poppy Plants during the First Week of Germination
Kristýna Kundrátová, Martin Bartas, Petr Pečinka, Ondřej Hejna, Andrea Rychlá, Vladislav Čurn, Jiří Červeň ... other authors
Year: 2021, Plants-Basel
journal article
 
Divergent distributions of inverted repeats and G-quadruplex forming sequences in Saccharomyces cerevisiae
Michaela Čutová, Jacinta Manta, Otília Porubiaková, Patrik Kaura, Jiří Šťastný, Eva Jagelská, Pratik Goswami, Martin Bartas, Václav Brázda ... other authors
Year: 2020, Genomics
journal article
 
Global analysis of inverted repeat sequences in human gene promoters reveals their non-random distribution and association with speci fic biological pathways
Václav Brázda, Martin Bartas, Jiří Lýsek, Jan Coufal, Miroslav Fojta
Year: 2020, Genomics
journal article
 
G-Quadruplexes in the Archaea Domain
Václav Brázda, Yu Luo, Martin Bartas, Patrik Kaura, Otilia Porubiaková, Jiří Šťastný, Petr Pečinka, Daniela Verga, Violette Da Cunha, Tomio S. Takahashi, Patrick Forterre, Hannu Myllykallio, Miroslav Fojta, Jean Louis Mergny ... other authors
Year: 2020, Biomolecules
journal article
 
Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa
Martin Bartas, Václav Brázda, Jiří Červeň, Petr Pečinka
Year: 2020, International Journal of Molecular Sciences
journal article
 
In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles
Martin Bartas, Václav Brázda, Natália Bohálová, Alessio Cantara, Adriana Volná, Tereza STACHUROVÁ, Kateřina Malachová, Eva Jagelská, Otília Porubiaková, Jiří Červeň, Petr Pečinka ... other authors
Year: 2020, Frontiers in Microbiology
journal article
 
In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles
Martin Bartas, Václav Brázda, Natália Bohálová, Alessio Cantara, Adriana Volná, Tereza STACHUROVÁ, Kateřina Malachová, Eva Jagelská, Otília Porubiaková, Jiří Červeň, Petr Pečinka ... other authors
Year: 2020, Frontiers in Microbiology
journal article
 
In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles
Martin Bartas, Václav Brázda, Natália Bohálová, Alessio Cantara, Adriana Volná, Tereza STACHUROVÁ, Kateřina Malachová, Eva Jagelská, Otília Porubiaková, Jiří Červeň, Petr Pečinka ... other authors
Year: 2020, Frontiers in Microbiology
journal article
 
G4Hunter web application: a web server for G-quadruplex prediction
Václav Brázda, Jan Kolomazník, Jiří Lýsek, Martin Bartas, Miroslav Fojta, Jiří Šťastný, Jean-Louis Mergny ... other authors
Year: 2019, BIOINFORMATICS
journal article
 
Identification of Distinct Amino Acid Composition of Human Cruciform Binding Proteins
Jiří Červeň, Petr Pečinka, Martin Bartas, Václav Brázda, Jack Liao, Pavla Bažantová ... other authors
Year: 2019, Molecular Biology
journal article
 
The Presence and Localization of G-Quadruplex Forming Sequences in the Domain of Bacteria
Martin Bartas, Michaela Čutová, Václav Brázda, Patrik Kaura, Jiří Šťastný, Jan Kolomazník, Jan Coufal, Pratik Goswami, Jiří Červeň, Petr Pečinka ... other authors
Year: 2019, Molecules
journal article
 
The Presence and Localization of G-Quadruplex Forming Sequences in the Domain of Bacteria
Martin Bartas, Michaela Čutová, Václav Brázda, Patrik Kaura, Jiří Šťastný, Jan Kolomazník, Jan Coufal, Pratik Goswami, Jiří Červeň, Petr Pečinka ... other authors
Year: 2019, Molecules
journal article
 
Bioinformatics analyses and in vitro evidence for five and six stacked G-quadruplex forming sequences
Martin Bartas, Václav Brázda, Václav Karlický, Jiří Červeň, Petr Pečinka
Year: 2018, BIOCHIMIE
journal article
 
Bioinformatics analyses and in vitro evidence for five and six stacked G-quadruplex forming sequences
Martin Bartas, Václav Brázda, Václav Karlický, Jiří Červeň, Petr Pečinka
Year: 2018, BIOCHIMIE
journal article
 
Complex analyses of inverted repeats in mitochondrial genomes revealed their importance and variability
Jana Čechová, Jiří Lýsek, Martin Bartas, Václav Brázda
Year: 2018, BIOINFORMATICS
journal article
 
Complex Analyses of Short Inverted Repeats in All Sequenced Chloroplast DNAs
Václav Brázda, Jiří Lýsek, Martin Bartas, Miroslav Fojta
Year: 2018, BioMed research international
journal article
 
Liver regeneration during the associating liver partition and portal vein ligation for staged hepatectomy procedure in Sus scrofa is positively modulated by stem cells
Martin Bartas, Jiří Červeň, Jan Oppelt, Matúš Peteja, Petr Vávra, Pavel Zonča, Václav Procházka, Václav Brázda, Petr Pečinka ... other authors
Year: 2018, Oncology letters
journal article
 
Preferential binding of p53 and BRCA1 proteins to naturally occurring G-quadruplexes forming sequences
Jiří Červeň, Nikol Mikysková, Anna Niziolová, Martin Bartas, Václav Brázda, Petr Pečinka ... other authors
Year: 2018
presentations (congresses, symposia, conferences, workshops)
 
Six-stacked G-quadruplexes as a preferential target of p53
Martin Bartas, Nikol Mikysková, Václav Brázda, Václav Karlický, Jiří Červeň, Vladimír Špunda, Petr Pečinka ... other authors
Year: 2018
presentations (congresses, symposia, conferences, workshops)
 
The Amino Acid Composition of Quadruplex Binding Proteins Reveals a Shared Motif and Predicts New Potential Quadruplex Interactors
Václav Brázda, Jiří Červeň, Martin Bartas, Nikol Mikysková, Jan Coufal, Petr Pečinka ... other authors
Year: 2018, Molecules
journal article
 
Bioinformatic study of putative five and six stacked G-quadruplexes occurence in Homo sapiens genome
Martin Bartas, Václav Brázda, Jiří Červeň, Václav Karlický, Vladimír Špunda, Petr Pečinka ... other authors
Year: 2017
abstract in proceedings
 

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Author
Title
Type of thesis
Year
Dvořáková Jitka
G-quadruplexes in blood coagulation pathway
Master's thesis
2023
Fromeliusová Amanda
Analysis of recurrent mutations in genomes of selected human viruses and their overlays with sequences capable of forming non-canonical nucleic acid structures
Master's thesis
2023
Harazimová Adéla
Analysis of Z-DNA/Z-RNA motifs occurrence in genomes of Viruses
Master's thesis
2023
Králiková Kateřina
Analysis of G-quadruplex-forming sequences in genes associated with Alzheimer's disease
Master's thesis
2023
Prausová Valerie
Coronaviral proteins with prion-like properties
Master's thesis
2023
Mikesková Gabriela
Characterization of DNA triplexes in the allograft rejection pathway
Master's thesis
2021
Dubská Kateřina
Biogenesis, molecular mechanisms, and functions of miRNAs in plants
Bachelor's thesis
2023
Prausová Valerie
Coronaviruses and the host cell cycle
Bachelor's thesis
2021
Fromeliusová Amanda
Analysis of G-quadruplex forming sequences in the genomes of viroids
Bachelor's thesis
2020
Mikesková Gabriela
DNA triplexes and prediction of their occurrence in model organisms
Bachelor's thesis
2019



Modernizace a komplexní převod předmětu Struktura a funkce nukleových kyselin do interaktivního prostředí Moodle aneb "Struktura a funkce nukleových kyselin: od A (-DNA) do Z (-DNA)")
Main solver
Mgr. et Mgr. Martin Bartas, Ph.D.
Period
1/2020 - 11/2020
Provider
Nezařazené projekty
State
finished
 
Progressive methods of study of biodegradation, antibiotic resistance and non-canonical DNA structures
Main solver
Mgr. et Mgr. Martin Bartas, Ph.D.
Period
1/2018 - 12/2018
Provider
Specifický VŠ výzkum
State
finished
 

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