Publications




Dangerous man-made range extension: Continental spined loach conquer northern Italy (Cobitis: Cobitidae)
Giovanni Delmastro, Lukáš Choleva, Veronika Labajová, Vendula Šlechtová, Vlastimil Šlechta, Veronika Bystryčanová, Jörg Böhlen
Year: 2022, Ichthyological Exploration of Freshwaters
journal article

Fungal pretreatment parameters for improving methane generation from anaerobic digestion of corn silage
Panagiotis Basinas, Jiˇrí Rusín, Kateřina Chamrádová, Kateřina Malachová, Zuzana Rybková, Čeněk Novotný
Year: 2022, Bioresource Technology
journal article

How does the ph of tree bark change with the presence of the epiphytic bryophytes from the family orthotrichaceae in the interaction with trunk inclination?
Markéta Kovářová, Petr Pyszko, Vítězslav Plášek
Year: 2022, Plants
journal article

Just a Fragment of Undescribed Diversity: Twenty New Oriental and Palearctic Species of Sciaroidea (Diptera), including DNA Sequence Data and Two New Fossil Genera
Jan Ševčík, Heikki Hippa, Nikola Burdíková
Year: 2022, Insects
journal article

Resistant Genes and Multidrug-Resistant Bacteria in Wastewater: A Study of Their Transfer to the Water Reservoir in the Czech Republic
Tereza STACHUROVÁ, Nikola Sýkorová, Jaroslav Semerád, Kateřina Malachová
Year: 2022, Life
journal article

A Eukaryote-Wide Perspective on the Diversity and Evolution of the ARF GTPase Protein Family
Romana Vargová, Jeremy G. Wideman, Romain Derelle, Vladimír Klimeš, Richard A. Kahn, Joel B. Dacks, Marek Eliáš
Year: 2021, GENOME BIOLOGY AND EVOLUTION
journal article

A New Model Trypanosomatid, Novymonas esmeraldas: Genomic Perception of Its "Candidatus Pandoraea novymonadis" Endosymbiont
Alexandra Zakharova, Andreu Saura Rebollar, Anzhelika Butenko, Lucie Podešvová, Sandra Warmusová, Aleksei Kostygov, Anna Nenaroková, Julius Lukeš, Fred R. Opperdoes, Vyacheslav Yurchenko
Year: 2021, MBIO
journal article

A Peculiar New Genus of Bibionomorpha (Diptera) with Brachycera-Like Modification of Antennae from Mid-Cretaceous Amber of Myanmar
Jan Ševčík, John Skartveit, Wiesław Krzemiński, Kornelia Skibińska
Year: 2021, Insects
journal article

A Synopsis of Orthotrichum s. lato (Bryophyta, Orthotrichaceae) in China, with Distribution Maps and a Key to Determination
Vítězslav Plášek, Zuzana Komínková, Ryszard Ochyra, Lucie FIALOVÁ, Shuiliang Guo, Mamtimin Sulayman
Year: 2021, PLANTS-BASEL
journal article

Amino Acid Composition in Various Types of Nucleic Acid-Binding Proteins
Martin Bartas, Jiří Červeň, Simona Guziurová, Kristyna Slychko, Petr Pečinka
Year: 2021, International Journal of Molecular Sciences
journal article

Analyses of Leishmania-LRV Co-Phylogenetic Patterns and Evolutionary Variability of Viral Proteins
Aleksei Kostygov, Danyil Grybchuk, Yulia Kleschenko, Daniil S. Chistyakov, Alexander N. Lukashev, Evgeny S. Gerasimov, Vyacheslav Yurchenko
Year: 2021, VIRUSES-BASEL
journal article

Analyses of viral genomes for G-quadruplex forming sequences reveal their correlation with the type of infection
Natália Bohálová, Alessio Cantara, Martin Bartas, Patrik Kaura, Jiří Šťastný, Petr Pečinka, Miroslav Fojta, Jean-Louis Mergny, Václav Brázda
Year: 2021, BIOCHIMIE
journal article

Analysis of diverse eukaryotes suggests the existence of an ancestral mitochondrial apparatus derived from the bacterial type II secretion system
Horváthová Lenka, Vojtěch Žárský, Tomáš Pánek, Romain Derelle, Jan Pyrih, Alžběta Motyčková, Veronika Klápšťová, Martina Vinopalová, Lenka Marková, Luboš Voleman, Vladimír Klimeš, Markéta Petrů, Zuzana Vaitová, Ivan Čepička, Klára Hryzáková, Karel Harant, Michael W. Gray, Mohamed Chami, Ingrid Guilvout, Olivera Francetic, B. Franz Lang, Čestmír Vlček, Anastasios D. Tsaousis, Marek Eliáš, Pavel Doležal
Year: 2021, NATURE COMMUNICATIONS
journal article

Analysis of Stop Codons within Prokaryotic Protein-Coding Genes Suggests Frequent Readthrough Events
Frida Belinky, Ishan Ganguly, Eugenia Poliakov, Vyacheslav Yurchenko, Igor B. Rogozin
Year: 2021, INT J MOL SCI
journal article

Aretopsis sandybrucei, a new deep-water shrimp (Malacostraca: Decapoda: Caridea: Alpheidae) from the Coral Sea
Seyedhossein Ashrafikarahroudi, Zdeněk Ďuriš, Arthur Anker
Year: 2021, European Journal of Taxonomy
journal article

Besse Workshop
Zdeněk Ďuriš, Milan Koch, Karolína Fišarová
Year: 2021
work experience abroad

Beta-lactam resistance development during the treatment processes of municipal wastewater treatment plants
Tereza Stachurová, Hana Piková, Martin Bartas, Jaroslav Semerád, Kateřina Svobodová, Kateřina Malachová
Year: 2021, CHEMOSPHERE
journal article

Bryophytes recorded in the Radhošť National Nature Reserve (Moravskoslezské Beskydy Mts) during the survey in 2020
Vítězslav Plášek
Year: 2021, Acta Musei Silesiae, Scientiae Naturales
journal article

Capsid Structure of Leishmania RNA Virus 1
Michaela Procházková, Tibor Fuzik, Danyil Grybchuk, Francesco Luca Falginella, Lucie Podešvová, Vyacheslav Yurchenko, Robert Vacha, Pavel Plevka
Year: 2021, J VIROL
journal article

Catalase impairs Leishmania mexicana development and virulence
Jovana Sádlová, Lucie Podešvová, Tomáš Bečvář, Claretta Bianchi, Evgeny S. Gerasimov, Andreu Saura Rebollar, Kristýna Glanzová, Tereza Leštinová, Nadezhda S. Matveeva, Ĺubomíra Chmelová
Year: 2021, Virulence
journal article

Catalase impairs Leishmania mexicana development and virulence
Jovana Sádlová, Lucie Podešvová, Tomáš Bečvář, Claretta Bianchi, Evgeny S. Gerasimov, Andreu Saura Rebollar, Kristýna Glanzová, Tereza Leštinová, Nadezhda S. Matveeva, Ľubomíra Chmelová, Denisa Mlacovská, Tatiana Spitzova, Barbora Vojtková, Petr Volf, Vyacheslav Yurchenko, Natalia Kraeva
Year: 2021, VIRULENCE
journal article

Characiopsis Borz? belongs to the Eustigmatophyceae
Amaral Raquel, Tereza Ševčíková, Marek Eliáš, Santos Lilia M. A.
Year: 2021, EUR J PHYCOL
journal article

CharaciopsisBorzi belongs to the Eustigmatophyceae
Raquel Amaral, Tereza Ševčíková, Marek Eliáš, Lilia M. A. Santos
Year: 2021, EUR J PHYCOL
journal article

Characterization of a new cosmopolitan genus of trypanosomatid parasites, Obscuromonas gen. nov. (Blastocrithidiinae subfam. nov.)
Julius Lukes, Martina Tesarova, Vyacheslav Yurchenko, Jan Votypka
Year: 2021, EUR J PROTISTOL
journal article

Community changes in odonate monitoring: why are long?term studies so relevant?
Aleš Dolný, Petr Pyszko, Hana Šigutová
Year: 2021, Insect Conservation and Diversity
journal article

Complete minicircle genome of Leptomonas pyrrhocoris reveals sources of its non-canonical mitochondrial RNA editing events
Evgeny S. Gerasimov, Anna A. Gasparyan, Dmitry A. Afonin, Sara L. Zimmer, Natalia Kraeva, Julius Lukeš, Vyacheslav Yurchenko, Alexander Kolesnikov
Year: 2021, NUCLEIC ACIDS RES
journal article

Corsica 2021 Expedition
Zdeněk Ďuriš, Pavlína Frolová
Year: 2021
work experience abroad

Could Bryophagous Beetles (Coleoptera: Byrrhidae) Help Us Understand Bryophyte Taxonomy? Preferences within the Hypnum cupressiforme Hedw. Species Complex
Petr Pyszko, Michaela Drgová, Stanislav Ožana, Ondřej Dorňák, David Rožek, Daniel Lee Číp, Vítězslav Plášek, Pavel Drozd
Year: 2021, PLANTS-BASEL
journal article

Development of Monoxenous Trypanosomatids and Phytomonads in Insects
Alexander O. Frolov, Aleksei Kostygov, Vyacheslav Yurchenko
Year: 2021, TRENDS PARASITOL
journal article

Differences in mitochondrial NADH dehydrogenase activities in trypanosomatids
Petra Čermáková, Anna Maďarová, Peter Baráth, Jana Bellová, Vyacheslav Yurchenko, Anton Horváth
Year: 2021, PARASITOLOGY
journal article

Diverse telomeres in trypanosomatids
Ester Poláková, Kristina Záhonová, Amanda Tábita da Silva Albanaz, Anzhelika Butenko, Lukeš Julius, Vyacheslav Yurchenko
Year: 2021, PARASITOLOGY
journal article

DNA Methylation, Deamination, and Translesion Synthesis Combine to Generate Footprint Mutations in Cancer Driver Genes in B-Cell Derived Lymphomas and Other Cancers
Igor B. Rogozin, Abiel Roche-Lima, Kathrin Tyryshkin, Kelvin Carrasquillo-Carrion, Artem G. Lada, Lennard Y. Poliakov, Elena Schwartz, Andreu Saura Rebollar, Vyacheslav Yurchenko, David N. Cooper, Anna R. Panchenko, Youri I. Pavlov
Year: 2021, Frontiers in Genetics
journal article

Editorial: Symbioses Between Protists and Bacteria/Archaea
Aleksei Kostygov, Joao M. P. Alves, Vyacheslav Yurchenko
Year: 2021, Frontiers in Microbiology
journal article

Effect of tree species identity and related habitat parameters on understorey bryophytes - interrelationships between bryophyte, soil and tree factors in a 50-year-old experimental forest
Kaja Rola, Vítězslav Plášek, Katarzyna Rozek, Szymon Zubek
Year: 2021, Plant and Soil
journal article

Effects of Landscape Patterns and Their Changes to Species Richness, Species Composition, and the Conservation Value of Odonates (Insecta)
Aleš Dolný, Stanislav Ožana, Michal Burda, Filip Harabiš
Year: 2021, Insects
journal article

Endosymbiont Capture, a Repeated Process of Endosymbiont Transfer with Replacement in Trypanosomatids Angomonas spp.
Tomáš Skalický, Joao M. P. Alves, Anderson C. Morais, Jana Režnarová, Anzhelika Butenko, Julius Lukeš, Myrna G. Serrano, Gregory A. Buck, Marta M. G Teixeira, Erney P. Camargo, Mandy Sanders, James A Cotton, Vyacheslav Yurchenko, Aleksei Kostygov
Year: 2021, Pathogens
journal article

Estimating the effect of tracking tag weight on insect movement using video analysis: A case study with a flightless orthopteran
Oto Kaláb, Pavel Rusnok, Petr Hurtík, Martin Tomis, Petr Kočárek, David MUSIOLEK
Year: 2021, PLOS ONE
journal article

Estimation of the Recent Expansion Rate of Ruspolia nitidula (Orthoptera) on a Regional and Landscape Scale
Oto Kaláb, Petr Pyszko, Petr Kočárek
Year: 2021, Insects
journal article

Euglenozoa: taxonomy, diversity and ecology, symbioses and viruses
Aleksei Kostygov, Anna Karnkowska, Jan Votypka, Daria Tashyreva, Kacper Maciszewski, Vyacheslav Yurchenko, Julius Lukeš
Year: 2021, Open Biology
journal article

Evolution of Diverse Strategies for Promoter Regulation
Václav Brázda, Martin Bartas, Richard Bowater
Year: 2021, Trends in Genetics
journal article

Expansion and transformation of the minor spliceosomal system in the slime mold Physarum polycephalum
Graham E. Larue, Marek Eliáš, Scott W. Roy
Year: 2021, CURR BIOL
journal article

First record of the desert earwig Forficula lucasi Dohrn, 1865 (Dermaptera: Forficulidae) in Greece: A hitchhiker among the refugees or a seldom encounter?
Savvas Zafeiriou, Petr Kočárek, Konstantinos Kalaentzis
Year: 2021, Journal of Insect Biodiversity
journal article

Fossils Shed a New Light on the Diversity and Disparity of the Family Limoniidae (Diptera, Nematocera)
Wiesław Krzemiński, Iwona Kania-Kłosok, Ewa Krzemińska, Jan Ševčík, Agnieszka Soszyńska-Maj
Year: 2021, Insects
journal article

Genetic diversity of Leishmania tropica: Unexpectedly complex distribution pattern
Arzuv Charyyeva, Ülfet Cetinkaya, Bora Özkan, Serkan Sahin, Nermin Yaprak, Izzet Sahin, Vyacheslav Yurchenko, Aleksei Kostygov
Year: 2021, ACTA TROP
journal article

Genome Analysis of Endotrypanum and Porcisia spp., Closest Phylogenetic Relatives of Leishmania, Highlights the Role of Amastins in Shaping Pathogenicity
Amanda Tábita da Silva Albanaz, Evgeny S Gerasimov, Jeffrey J. Shaw, Jovana Sádlová, Julius Lukeš, Petr Volf, Fred R. Opperdoes, Aleksei Kostygov, Anzhelika Butenko, Vyacheslav Yurchenko
Year: 2021, Genes
journal article

Genome Fractionation and Loss of Heterozygosity in Hybrids and Polyploids.
Karel Janko, Oldřich Bartoš, Jan Kočí, Jan Röslein, Edita Janková Drdová, Jan Kotusz, Jan Eisner, Martin Mokrejš, Eva Štefková-Kašparová
Year: 2021, Molecular Biology and Evolution
journal article

Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri
Emily K. Herman, Alex Greninger, Mark van der Giezen, Michael L. Ginger, Inmaculada Ramirez-Macias, Haylea C. Miller, Matthew J. Morgan, Anastasios D. Tsaousis, Katrina Velle, Romana Vargová, Kristýna Záhonová, Sebastian Rodrigo Najle, Georgina MacIntyre, Norbert Muller, Mattias Wittwer, Denise C. Zysset-Burri, Marek Eliáš, Claudio H. Slamovits, Matthew T. Weirauch, Lillian Fritz-Laylin, Francine Marciano-Cabral, Geoffrey J. Puzon, Tom Walsh, Charles Chiu, Joel B. Dacks
Year: 2021, BMC BIOLOGY
journal article

Genomics of Trypanosomatidae: Where We Stand and What Needs to Be Done?
Vyacheslav Yurchenko, Anzhelika Butenko, Aleksei Kostygov
Year: 2021, PATHOGENS
journal article

G-Quadruplex in Gene Encoding Large Subunit of Plant RNA Polymerase II: A Billion-Year-Old Story
Adriana Volná, Martin Bartas, Václav Karlický, Jakub Nezval, Kristýna Kundrátová, Petr Pečinka, Vladimír Špunda, Jiří Červeň
Year: 2021, INT J MOL SCI
journal article

G-Quadruplex in Gene Encoding Large Subunit of Plant RNA Polymerase II: A Billion-Year-Old Story
Adriana Volná, Martin Bartas, Václav Karlický, Jakub Nezval, Kristýna Kundrátová, Petr Pečinka, Vladimír Špunda, Jiří Červeň
Year: 2021, International Journal of Molecular Sciences
journal article


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