Publications




Palaeoecological signals from floodplain and terrace peatlands decipher ancient land use in the Mid-Kama Valley (Cis-Ural, Russia)
Vlada Batalova, Pavel Sannikov, Sergey Kopytov, Ekaterina Novikova, Elizaveta Orlova, Mikhail Pereskokov, Vitaliy Mingalev, Leonid Viazov, Lyudmila Shumilovskikh
Year: 2026, ANTHROPOCENE
journal article
 
Adapting a country-specific Dragonfly Biotic Index: Framework for seven Central European countries and transboundary pattern analysis
Eva Bílková, Hana Šigutová, Petr Pyszko, Veronika PRIELOŽNÁ, Aleš Dolný
Year: 2025, ECOL INDIC
journal article
 
Ambrosia gall midges (Diptera: Cecidomyiidae) and their microbial symbionts as a neglected model of fungus-farming evolution
Petr Pyszko, Hana Šigutová, Jan Ševčík, Michaela Drgová, Denisa Hařovská, Pavel Drozd
Year: 2025, FEMS Microbiology Reviews
journal article
 
An expanded phylogenomic analysis of Heterolobosea reveals the deep relationships, non-canonical genetic codes, and cryptic flagellate stages in the group
Tomáš Pánek, Alexander K. Tice, Pia Corre, Pavla Hrubá, David ŽIHALA, Ryoma Kamikawa, Euki Yazaki, Takashi Shiratori, Keitaro Kume, Tetsuo Hashimoto, Ken-Ichiro Ishida, Miluše Hradilová, Jeffrey D. Silberman, Andrew Roger, Yuji Inagaki, Marek Eliáš, Matthew W. Brown, Ivan Cepicka
Year: 2025, Molecular Phylogenetics and Evolution
journal article
 
An initial comparative study on the antennal morphology of Zoraptera (Insecta) with special reference to the sensilla
Michel J. Faucheux, Gabriela Pačková, Petr Kočárek, Robin Kundrata
Year: 2025, Scientific Reports
journal article
 
Analysis of Leishbuviridae from Trypanosomatids
Danyil Grybchuk, Aleksei Kostygov, Vyacheslav Yurchenko
Year: 2025, Humana
specialist book chapter
 
Ancient DNA reveals the prehistory of the Uralic and Yeniseian peoples
Tian Chen Zeng, Leonid Viazov, Alexander Kim, Pavel Flegontov, Kendra Sirak, Robert Maier, Iosif Lazaridis, Ali Akbari, Michael Frachetti, Alexey A. Tischkin, Natalia E. Ryabogina, Sergey A. Agapov, Danila S. Agapov, Anatoliy N. Alekseev, Gennady Boeskorov, Anatoly P. Derevianko, Viktor M. Dyakonov, Dmitry N. Enshin, Alexey V. Fribus, Yaroslav V. Frolov, Sergey P. Grushin, Alexander A. Khokhlov, Kirill Yu. Kiryushin, Yurii F. Kiryushin, Egor P. Kitov, Pavel Kosintsev, Igor V. Kovtun, Nikolai P. Makarov, Viktor V. Morozov, Egor N. Nikolaev, Marina P. Rykun, Tatyana M. Savenkova, Marina V. Shchelchkova, Vladimir N. Shirokov, Svetlana N. Skochina, Olga S. Sherstobitova, Sergey M. Slepchenko, Konstantin N. Solodovnikov, Elena N. Solovyova, Aleksandr D. Stepanov, Aleksei A. Timoshchenko, Aleksandr S. Vdovin, Anton V. Vybornov, Elena V. Balanovska, Stanislav Dryomov, Garrett Hellenthal, Kenneth Kidd, Johannes Krause, Elena Starikovskaya, Rem Sukernik, Tatiana Tatarinova, Mark G. Thomas, Maxat Zhabagin, Kim Callan, Olivia Cheronet, Daniel Fernandes, Denise Keating, Francesca Candilio, Lora Iliev, Aisling Kearns, Kadir Toykan Özdoğan, Matthew Mah, Adam Micco, Megan Michel, Iñigo Olalde, Fatma Zalzala, Swapan Mallick, Nadin Rohland, Ron Pinhasi, Vagheesh M. Narasimhan, David Reich
Year: 2025, Nature
journal article
 
Antibiotic Resistance in Wastewater: Detection, Quantification, and Risk Assessment
Tereza Stachurová, Zuzana Rybková, Kateřina Malachová
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Antimicrobial effects of novel nanomaterials for medicine
Zuzana Rybková, Kateřina Malachová, Tereza Stachurová, Sylva Holešová, Karla Čech Barabaszová, Kateřina Škrlová, Jakub Zágora, Daniela Plachá
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Author Correction: The genetic origin of the Indo-Europeans
Iosif Lazaridis, Nick Patterson, David Anthony, Leonid Viazov, Romain Fournier, Harald Ringbauer, Iñigo Olalde, Alexander A. Khokhlov, Egor P. Kitov, Natalia I. Shishlina, Sorin C. Ailincăi, Sergey A. Agapov, Danila S. Agapov, Elena Batieva, Baitanayev Bauyrzhan, Zsolt Bereczki, Alexandra Buzhilova, Piya Changmai, Andrey A. Chizhevsky, Ion Ciobanu, Mihai Constantinescu, Marietta Csányi, János Dani, Peter K. Dashkovskiy, Sándor Évinger, Anatoly Faifert, Pavel Flegontov, Alin Frînculeasa, Mădălina N. Frînculeasa, Tamás Hajdu, Tom Higham, Paweł Jarosz, Pavol Jelínek, Valeri I. Khartanovich, Eduard N. Kirginekov, Viktória Kiss, Alexandera Kitova, Alexeiy V. Kiyashko, Jovan Koledin, Arkady Korolev, Pavel Kosintsev, Gabriella Kulcsár, Pavel Kuznetsov, Rabadan Magomedov, Aslan M. Mamedov, Eszter Melis, Vyacheslav Moiseyev, Erika Molnár, Janet Monge, Octav Negrea, Nadezhda A. Nikolaeva, Mario Novak, Maria Ochir-Goryaeva, György Pálfi, Sergiu Popovici, Marina P. Rykun, Tatyana M. Savenkova, Vladimir P. Semibratov, Nikolai N. Seregin, Alena Šefčáková, Raikhan S. Mussayeva, Irina Shingiray, Vladimir N. Shirokov, Angela Simalcsik, Kendra Sirak, Konstantin N. Solodovnikov, Judit Tárnoki, Alexey A. Tishkin, Viktor Trifonov, Sergey Vasilyev, Ali Akbari, Esther S. Brielle, Kim Callan, Francesca Candilio, Olivia Cheronet, Elizabeth Curtis, Olga Flegontova, Lora Iliev, Aisling Kearns, Denise Keating, Ann Marie Lawson, Matthew Mah, Adam Micco, Megan Michel, Jonas Oppenheimer, Lijun Qiu, J. Noah Workman, Fatma Zalzala, Anna Szécsényi-Nagy, Pier Francesco Palamara, Swapan Mallick, Nadin Rohland, Ron Pinhasi, David Reich
Year: 2025, Nature
journal article
 
Biodegradable polycaprolactone/clay nanocomposites for biotechnological applications
Sylva Holešová, Karla Čech Barabaszová, Zuzana Rybková, Kateřina Malachová
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Biological pretreatment of anaerobic digestion solid by-product with white rot fungi: Assessment of digestate delignification and investigation of process parameters improving the biodegradation performance of sludge
Panagiotis Basinas, Kateřina Chamrádová, Zuzana Rybková, Jiří Rusín, Kateřina Malachová
Year: 2025, Chemical Engineering Journal
journal article
 
Can nest design hinder brood parasitism success?
Angela Moreras, Jere Tolvanen, Michal Kysučan, Peter Samaš, Tomáš Grim, Robert Thomson
Year: 2025, Journal of Avian Biology
journal article
 
Characterization of Lercomonas mokradensis gen. et sp. nov. enriches the phylogenetic and taxonomic diversity of Chloromonadinia (Chlorophyceae)
Dovilé Barcyté, Marek Eliáš
Year: 2025, Phycologia
journal article
 
Comparative Analysis of Protist Communities in Oilsands Tailings Using Amplicon Sequencing and Metagenomics
Kristína Záhonová, Harpreet Kaur, Chantel C. Furgason, Angela V. Smirnova, Peter F. Dunfield, Joel B. Dacks
Year: 2025, Environmental Microbiology
journal article
 
Cryptic diversity in endemic Canarilabis revealed by a multigene phylogeny (Dermaptera: Anisolabididae)
Vojtěch Bonczek, Ivona Kočárková, Pilar Jurado-Angulo, Petr Kočárek
Year: 2025, Contributions to Zoology
journal article
 
Curated global occurrence dataset of the insect order Zoraptera
Oto Kaláb, Johana Hoffmannova, Gabriela Pačková, Ivona Kočárková, Robin Kundrata, Petr Kočárek
Year: 2025, Scientific Data
journal article
 
Developing an integrative understanding of escape mode decisions
Mario Díaz, Anders Moller, Yanina Benedetti, Daniel Blumstein, Gábor Markó, Federico Morelli, Juan Ibáñez-Alamo, Jukka Jokimaki, Marja-Liisa Kaisanlahti-Jokimaki, Peter Mikula, Kunter Tatte, Piotr Tryjanowski, Tomáš Grim
Year: 2025, Animal Behaviour
journal article
 
Diplonemid protists possess exotic endomembrane machinery, impacting models of membrane trafficking in modern and ancient eukaryotes
Kristína Záhonová, Lukeš Julius, Joel B. Dacks
Year: 2025, Current Biology
journal article
 
Distribution and phylogenetic position of Spiralizoros hainanensis (Zoraptera: Spiralizoridae)
Petr Kočárek, Yoko Matsumura, Louis Deharveng, Ivona Kočárková, Robin Kundrata, André Nel
Year: 2025, JOURNAL OF ASIA-PACIFIC ENTOMOLOGY
journal article
 
Dragonfly larvae rearing: experimental insights and best practices
Eva Bílková, Veronika Kornová, Stanislav Ožana, Petr Pyszko, Hana Schindlerová, Radana Chytilová, Aleš Dolný
Year: 2025, Environmental Entomology
journal article
 
Ekologické strategie rostlin na odkališti Dolu Orlová-Lazy, okr. Karviná: analýza klonality a životních forem
Jakub Plachta, Šárka Cimalová
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Evaluation of antimicrobial and biocompatible properties of nanocomposites
Zuzana Rybková, Kateřina Malachová, Tereza Stachurová, Daniela Plachá, Kateřina Škrlová, Jakub Zágora, Sylva Holešová, Karla Čech Barabaszová
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Evolutionary divergent kinetoplast genome structure and RNA editing patterns in the trypanosomatid Vickermania
Evgeny S. Gerasimov, Dmitry A. Afonin, Ingrid Sveráková, Andreu Saura Rebollar, Natália Trusina, Ondřej Gahura, Alexandra Zakharova, Anzhelika Butenko, Peter Barath, Anton Horvath, Fred R. Opperdoes, David Pérez-Morga, Sara L. Zimmer, Lukeš Julius, Vyacheslav Yurchenko
Year: 2025, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
journal article
 
Evolutionary Insights into the Length Variation of DNA Damage Response Proteins Across Eukaryotes
Dominic Wiredu-Boakye, Laurence Higgins, Ondřej Gahura, Anzhelika Butenko, Guy Leonard, Mark A Freeman, Árni Kristmundsson, Karen Moore, Jamie W Harrison, Shani Mac Donald, Vyacheslav Yurchenko, Bryony A P Williams, Richard Chahwan
Year: 2025, Genome Biology and Evolution
journal article
 
Faster adaptation but slower divergence of X chromosomes under paternal genome elimination
Robert B. Baird, Thomas J. Hitchcock, Jan Ševčík, Katy M. Monteith, Andy Gardner, Laura Ross, Andrew J. Mongue
Year: 2025, Nature Communications
journal article
 
From blow to DNA: citizen science advancing genetic research on southern right whales
Petra Neveceralova, Vladimir Soukup, Jan Stundl, Jason Keith Stafford, Pavel Hulva
Year: 2025, Conservation Genetics Resources
journal article
 
Genomic Analysis of Hair Sheep From West/Central Africa Reveals Unique Genetic Diversity and Ancestral Links to Breed Formation in the Caribbean
Pamela Wiener, Juliane Friedrich, Melissa M Marr, Gustave Simo, Vincent N Tanya, Keith T Ballingall, Pavel Flegontov, Benjamin D Rosen, Guillaume Salle, Gordon Spangler, Curtis P Van Tassell, Mazdak Salavati, Felix Meutchieye, Emily L Clark
Year: 2025, Molecular Ecology
journal article
 
Genotoxicity detection of nanoparticles and nanocomposite ZnO by the Comet assay
Kateřina Malachová, Zuzana Rybková, Ondřej Dlabaja, Sylva Holešová, Karla Čech Barabaszová
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Highly accurate Batesian mimicry of wasps dates back to the Early Oligocene and was driven by non-passerine birds
Klára Daňková, Jiří Hadrava, Jakub Straka, Michael Mikát, Alice Exnerova, Pavel Hulva, Valentin Nidergas, Martina Pecharová, André Nel, Jakub Prokop
Year: 2025, CURRENT BIOLOGY
journal article
 
Highly Conserved Ecosystems Facing Climate Change: Rapid Shifts in Odonata Assemblages of Central European Bogs
Hana Šigutová, Petr Pyszko, Eva Bílková, Aleš Dolný
Year: 2025, Global Change Biology
journal article
 
Highly efficient antimicrobial coating based on polylactide prepared via supercritical fluid technology
Jakub Zágora, Zuzana Rybková, Kateřina Škrlová, Kateřina Malachová, Alexandra Munoz-Bonilla, Marta Fernández-Garcia, Daniela Plachá
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Historical survivorship and demographic structure of zoo-housed hippopotamuses (Hippopotamidae)
João P. Meireles, Lara Scherer, Laurie Bingaman Lackey, Beatrice Steck, Jan Pluháček, Marco Roller, Dennis W. H. Müller, Mads F. Bertelsen, Marcus Clauss
Year: 2025, Journal of Zoo and Aquarium Research
journal article
 
Improvement of the methane generation potential of the anaerobic digestion solid residue by implementing a biological pretreatment with the basidiomycete I. lacteus at various conditions
Kateřina Chamrádová, Panagiotis Basinas, Zuzana Rybková, Kateřina Malachová
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Long shared haplotypes identify the southern Urals as a primary source for the 10th-century Hungarians
Balázs Gyuris, Leonid Viazov, Attila Türk, Pavel Flegontov, Bea Szeifert, Péter Langó, Balázs Gusztáv Mende, Veronika Csáky, Andrey A. Chizhevskiy, Ilgizar R. Gazimzyanov, Aleksandr A. Khokhlov, Aleksandr G. Kolonskikh, Natalia P. Matveeva, Rida R. Ruslanova, Marina P. Rykun, Ayrat Sitdikov, Elizaveta V. Volkova, Sergei G. Botalov, Dmitriy G. Bugrov, Ivan V. Grudochko, Oleksii Komar, Alexander A. Krasnoperov, Olga E. Poshekhonova, Irina Chikunova, Flarit Sungatov, Dmitrii A. Stashenkov, Sergei Zubov, Alexander S. Zelenkov, Harald Ringbauer, Olivia Cheronet, Ron Pinhasi, Ali Akbari, Nadin Rohland, Swapan Mallick, David Reich, Anna Szécsényi-Nagy
Year: 2025, Cell
journal article
 
Molecular phylogeny of Salmoneus Holthuis, 1955 and its satellite genera (Decapoda: Caridea: Alpheidae) reveals hidden diversity and multiple instances of morphological and ecological convergence
Hossein Ashrafi, Arthur Anker, Zdeněk Ďuriš
Year: 2025, Zoological Journal of the Linnean Society
journal article
 
Multiple plastid losses within photosynthetic stramenopiles revealed by comprehensive phylogenomics
Kristina X. Terpis, Eric D. Salomaki, Dovilé Barcyté, Tomáš Pánek, Heroen Verbruggen, Martin Kolísko, J. Craig Bailey, Marek Eliáš, Christopher E. Lane
Year: 2025, Current Biology
journal article
 
Natural conditions and sociocultural development in the Mid-Kama region (cis-Ural, Russia) over the last ten millennia: insights from the Shabunichi-1 peat core
Vlada Batalova, Pavel Sannikov, Mikhail Pereskokov, Vitaliy Mingalev, Leonid Viazov, Iuliia Salova, Ekaterina Novikova, Elizaveta Mekhonoshina, Elizaveta Orlova, Lyudmila Shumilovskikh
Year: 2025, VEG HIST ARCHAEOBOT
journal article
 
New species of Plesioaxymyia Sinclair (Diptera, Axymyiidae) from the Palaearctic Region, including an updated molecular phylogeny of the family
Alexei Polevoi, Nikola BURDÍKOVÁ, Jan Ševčík
Year: 2025, ZooKeys
journal article
 
Nitrogen Deficiency Accelerates Rice Leaf Senescence Through ABA Signaling and Sugar Metabolic Shifts
Muhmmad Asad Ullah Asad, Xianyue Guan, Yan Zhang, Lujian Zhou, Martin Bartas, Najeeb Ullah, Weijun Zhou, Fangmin Cheng
Year: 2025, PHYSIOL PLANTARUM
journal article
 
Ochrana a management pohornické krajiny s využitím zástupných druhů rostlin
Karolína Červenková, Šárka Cimalová
Year: 2025
presentations (congresses, symposia, conferences, workshops)
 
Paradiplatys grosseri sp. nov., the first Diplatyidae earwig from the Arabian Peninsula (Dermaptera: Diplatyidae)
Petr Kočárek, Christian Monnerat, Matthias Borer
Year: 2025, Zoology in the Middle East
journal article
 
Performance of qpAdm-based screens for genetic admixture on graph–shaped histories and stepping stone landscapes
Olga Flegontova, Ulas Isildak, Eren Yüncü, Matthew P Williams, Christian D Huber, Jan Kočí, Leonid Viazov, Piya Changmai, Pavel Flegontov
Year: 2025, GENETICS
journal article
 
Pervasive horizontal transmission of Wolbachia in natural populations of closely related and widespread tropical skipper butterflies
Pedro Ribeiro, Anzhelika Butenko, Daniel Linke, Hamid Reza Ghanavi, Joana Isabel Meier, Niklas Wahlberg, Pável Matos-Maraví
Year: 2025, BMC MICROBIOL
journal article
 
Phylogenomics defines Streptofilum as a novel deep branch of streptophyte algae
Vojtěch Žárský, Marek Eliáš
Year: 2025, Current Biology
journal article
 
Ribosomal A-site interactions with near-cognate tRNAs drive stop codon readthrough
Zuzana Čapková Pavlíková, Petra Miletinova, Adriana Roithova, Klára Pospíšilová, Kristína Záhonová, Ambar Kachale, Thomas Becker, Ignacio M. Durante, Julius Lukeš, Zdeněk Paris, Petra Beznoskova, Leoš Shivaya Valášek
Year: 2025, Nature Structural & Molecular Biology
journal article
 
Scientists' warning on the need for greater inclusion of dragonflies in global conservation
Michael J. Samways, Alex Córdoba-Aguilar, Charl Deacon, Fernanda Alves-Martins, Ian R. C. Baird, S. Henrik Barmentlo, Leandro Schlemmer Brasil, Jason T. Bried, Viola Clausnitzer, Adolfo Cordero-Rivera, Felipe H. Datto-Liberato, Geert De Knijf, Aleš Dolný, Ryo Futahashi, Rhainer Guillermo-Ferreira, Christopher Hassall, Leandro Juen, Rassim Khelifa, Federico Lozano, Javier Muzón, Göran Sahlén, Melissa Sánchez Herrera, John P. Simaika, Robby Stoks, Catalina M. Suárez-Tovar, Frank Suhling, Yoshitaka Tsubaki, Marina Vilenica
Year: 2025, Insect Conservation and Diversity
journal article
 
Small whiteface (Leucorrhinia dubia: Odonata) reintroduction update highlights the importance of long‐term monitoring and regular habitat management
Hana Šigutová, Eva Bílková, Stanislav Ožana, Aleš Dolný
Year: 2025, INSECT CONSERV DIVER
journal article
 
Somy evolution in the honey bee infecting trypanosomatid parasite Lotmaria passim
Lindsey M Markowitz, Anthony Nearman, Zexuan Zhao, Dawn Boncristiani, Anzhelika Butenko, Luis Miguel de Pablos, Arturo Marin, Xuguang Hu, Carlos A Machado, Ryan S Schwarz, Evan C Palmer-Young, Jay D Evans
Year: 2025, G3: Genes, Genomes, Genetics
journal article
 
The Asgard archaeal origins of Arf family GTPases involved in eukaryotic organelle dynamics
Romana Vargová, Roxanne Chevreau, Marine Alves, Camille Courbin, Kara Terry, Pierre Legrand, Marek Eliáš, Julie Menetrey, Joel B. Dacks, Catherine L. Jackson
Year: 2025, NATURE MICROBIOLOGY
journal article
 

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